5W08
A/Texas/50/2012(H3N2) Influenza hemagglutinin in complex with K03.12 Fab
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Hemagglutinin HA1 | polymer | 291 | 32618.8 | 6 | UniProt (R4L1D1) Pfam (PF00509) | Influenza A virus (A/Texas/50/2012(H3N2)) | |
| 2 | G, I, K, M, O... (G, I, K, M, O...) | K03.12 antibody heavy chain | polymer | 244 | 26533.7 | 6 | UniProt (S6C4S0) Pfam (PF07686) Pfam (PF07654) | Homo sapiens (Human) | |
| 3 | H, J, L, N, P... (H, J, L, N, P...) | K03.12 antibody light chain | polymer | 214 | 22404.7 | 6 | UniProt (Q6IPQ0) Pfam (PF07686) Pfam (PF07654) | Homo sapiens (Human) | |
| 4 | S, V, W, Y, Z (S, V, W, Y, Z) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 5 | In PDB GlyTouCan (G42666HT) | |||
| 5 | AA, BA, T, U, X (a, b, T, U, X) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 5 | In PDB GlyTouCan (G15407YE) | |||
| 6 | CA, DA, EA, FA, GA... (A, B, C, D, E...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 16 | Chemie (NAG) | |||
| 7 | SA (I) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 8 | AB, BB, CB, DB, EB... (H, I, J, K, L...) | water | water | 18.0 | 722 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 37 - 319 (UniProt: R4L1D1)
G, I, K, M, O, Q: 1 - 133 (PDB: 5W08)
G, I, K, M, O, Q: 134 - 238 (UniProt: S6C4S0)
H, J, L, N, P, R: 1 - 113 (PDB: 5W08)
H, J, L, N, P, R: 114 - 214 (UniProt: Q6IPQ0)
| PDB | External Database | Details |
|---|---|---|
| Gly 320 | - | expression tag |
| Ala 321 | - | expression tag |
| Leu 322 | - | expression tag |
| Glu 323 | - | expression tag |
| Val 324 | - | expression tag |
| Leu 325 | - | expression tag |
| Phe 326 | - | expression tag |
| Gln 327 | - | expression tag |
G, I, K, M, O, Q: 134 - 238 (UniProt: S6C4S0)
| PDB | External Database | Details |
|---|---|---|
| His 239 | - | expression tag |
| His 240 | - | expression tag |
| His 241 | - | expression tag |
| His 242 | - | expression tag |
| His 243 | - | expression tag |
| His 244 | - | expression tag |
H, J, L, N, P, R: 114 - 214 (UniProt: Q6IPQ0)
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 18 |
| Total formula weight | 489343.1 | |
| Branched | Number of molecules | 10 |
| Total formula weight | 5054.7 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 3631.4 | |
| All* | Total formula weight | 498029.3 |
