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5VXO

Crystal Structure Analysis of human CLYBL in complex with propionyl-CoA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Citrate lyase subunit beta-like protein, mitochondrialpolymer32536075.53UniProt (Q8N0X4)
Pfam (PF03328)
Homo sapiens (Human)Citrate lyase beta-like,Beta-methylmalate synthase,Malate synthase
2D, KA, W
(A, C, B)
propionyl Coenzyme Anon-polymer823.63Chemie (1VU)
3AA, BA, CA, DA, E...
(B, A, C)
1,2-ETHANEDIOLnon-polymer62.128Chemie (EDO)
4HA, IA, P, Q, R...
(B, A, C)
DI(HYDROXYETHYL)ETHERnon-polymer106.17Chemie (PEG)
5JA, S, UA
(B, A, C)
TRIETHYLENE GLYCOLnon-polymer150.23Chemie (PGE)
6T, U, VA
(A, C)
TETRAETHYLENE GLYCOLnon-polymer194.23Chemie (PG4)
7V
(A)
PHOSPHATE IONnon-polymer95.01Chemie (PO4)
8WA, XA, YA
(A, B, C)
waterwater18.0363Chemie (HOH)
Sequence modifications
A, B, C: 30 - 340 (UniProt: Q8N0X4)
PDBExternal DatabaseDetails
Met 24-expression tag
Ala 25-expression tag
Ser 26-expression tag
Leu 27-expression tag
Ala 28-expression tag
Asn 29-expression tag
Leu 341-expression tag
Glu 342-expression tag
His 343-expression tag
His 344-expression tag
His 345-expression tag
His 346-expression tag
His 347-expression tag
His 348-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight108226.6
Non-Polymers*Number of molecules45
Total formula weight6079.7
All*Total formula weight114306.3
*Water molecules are not included.

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PDB entries from 2025-07-09

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