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5VSF

Structure of human GLP SET-domain (EHMT1) in complex with inhibitor 17

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Histone-lysine N-methyltransferase EHMT1polymer26130232.42UniProt (Q9H9B1)
Pfam (PF05033)
Pfam (PF00856)
Homo sapiens (Human)Euchromatic histone-lysine N-methyltransferase 1,Eu-HMTase1,G9a-like protein 1,GLP1,Histone H3-K9 methyltransferase 5,H3-K9-HMTase 5,Lysine N-methyltransferase 1D
2C, K
(A, B)
S-ADENOSYLMETHIONINEnon-polymer398.42Chemie (SAM)
PubChem (5136)
PubChem (34755)
PubChem (58633578)
PubChem (60038769)
PubChem (58766358)
PubChem (73897310)
PubChem (9865603)
PubChem (87224684)
PubChem (12312798)
PubChem (131697735)
PubChem (145712080)
PubChem (132988922)
PubChem (134692588)
PubChem (135030730)
PubChem (140459785)
PubChem (163046094)
3D, E, F, G, L...
(A, B)
ZINC IONnon-polymer65.48Chemie (ZN)
4H, P
(A, B)
N~2~-cyclopentyl-6,7-dimethoxy-N~2~-methyl-N~4~-(1-methylpiperidin-4-yl)quinazoline-2,4-diaminenon-polymer399.52Chemie (9HG)
PubChem (129012137)
5I
(A)
1,4-DIETHYLENE DIOXIDEnon-polymer88.11Chemie (DIO)
6J, Q
(A, B)
GLYCEROLnon-polymer92.12Chemie (GOL)
PubChem (753)
7R, S
(A, B)
waterwater18.0492Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight60464.7
Non-Polymers*Number of molecules15
Total formula weight2391.5
All*Total formula weight62856.2
*Water molecules are not included.

251422

PDB entries from 2026-04-01

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