5VQH

Crystal structure of the extended Tudor domain from BmPAPI in complex with sDMA

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B	Tudor and KH domain-containing protein homolog	polymer	237	26953.0	2	UniProt (H9JD76) Pfam (PF00567) In PDB	Bombyx mori (Silk moth)	Partner of PIWIs protein,BmPAPI
2	A, B	N3, N4-DIMETHYLARGININE	non-polymer		202.3	2	Chemie (2MR)
3		water	water		18.0	153	Chemie (HOH)

Sequence modifications

A, B: 0 - 217 (UniProt: H9JD76)

PDB	External Database	Details
Met -19	-	initiating methionine
Gly -18	-	expression tag
Ser -17	-	expression tag
Ser -16	-	expression tag
His -15	-	expression tag
His -14	-	expression tag
His -13	-	expression tag
His -12	-	expression tag
His -11	-	expression tag
His -10	-	expression tag
Glu -9	-	expression tag
Asn -8	-	expression tag
Leu -7	-	expression tag
Tyr -6	-	expression tag
Phe -5	-	expression tag
Gln -4	-	expression tag
Ser -3	-	expression tag
Asn -2	-	expression tag
Ala -1	-	expression tag
Arg 144	Thr 389	conflict

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	53906.1
Non-Polymers*	Number of molecules	2
	Total formula weight	404.5
All*	Total formula weight	54310.6

*Water molecules are not included.