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5VPL

CRYSTAL STRUCTURE OF DER F 1 COMPLEXED WITH FAB 4C1

Replaces:  3RVV
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Der f 1 variantpolymer22325171.01UniProt (I2CMD3)
Pfam (PF00112)
UniProt (by SIFTS) (P16311)
Dermatophagoides farinae (American house dust mite)
2B
(C)
4C1 - LIGHT CHAINpolymer21323937.61UniProt (Q7TS98)
Pfam (PF07686)
Pfam (PF07654)
Mus musculus (MOUSE)
3C
(D)
4C1 - HEAVY CHAINpolymer25527677.31Mus musculus (MOUSE)
4D
(A)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.21Chemie (NAG)
5E
(A)
CALCIUM IONnon-polymer40.11Chemie (CA)
6F, G, H, I
(A, C)
1,2-ETHANEDIOLnon-polymer62.14Chemie (EDO)
7J, K, L
(A, C, D)
waterwater18.0650Chemie (HOH)
Sequence modifications
C: 2 - 213 (UniProt: Q7TS98)
PDBExternal DatabaseDetails
Gln 1-expression tag
Val 3Lys 25conflict
Phe 9Ser 31conflict
Thr 14Ser 36conflict
Tyr 30Asn 52conflict
Leu 36Phe 58conflict
Leu 44Pro 66conflict
Ile 55Val 77conflict
Thr 56Asp 78conflict
Tyr 96Arg 118conflict
Met 106Ile 128conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight76785.9
Non-Polymers*Number of molecules6
Total formula weight509.6
All*Total formula weight77295.4
*Water molecules are not included.

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PDB entries from 2024-10-30

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