5VOX
Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 1)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E | V-type proton ATPase catalytic subunit A,V-type proton ATPase catalytic subunit A | polymer | 617 | 67796.5 | 3 | UniProt (P17255) Pfam (PF02874) Pfam (PF16886) Pfam (PF00006) Pfam (PF22919) In PDB | Saccharomyces cerevisiae (Baker's yeast) | V-ATPase subunit A,Vacuolar proton pump subunit A,V-ATPase subunit A,Vacuolar proton pump subunit A |
2 | B, D, F | V-type proton ATPase subunit B | polymer | 517 | 57815.0 | 3 | UniProt (P16140) Pfam (PF02874) Pfam (PF00006) Pfam (PF22919) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit B,V-ATPase 57 kDa subunit,Vacuolar proton pump subunit B |
3 | G, I, K | V-type proton ATPase subunit E | polymer | 233 | 26508.4 | 3 | UniProt (P22203) Pfam (PF01991) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit E,V-ATPase 27 kDa subunit,Vacuolar proton pump subunit E |
4 | H, J, L | V-type proton ATPase subunit G | polymer | 114 | 12738.7 | 3 | UniProt (P48836) Pfam (PF03179) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit G,V-ATPase 13 kDa subunit,Vacuolar proton pump subunit G |
5 | M | V-type proton ATPase subunit D | polymer | 256 | 29235.0 | 1 | UniProt (P32610) Pfam (PF01813) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit D,Vacuolar proton pump subunit D |
6 | N | V-type proton ATPase subunit F | polymer | 118 | 13479.2 | 1 | UniProt (P39111) Pfam (PF01990) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit F,V-ATPase 14 kDa subunit,Vacuolar proton pump subunit F |
7 | O | V-type proton ATPase subunit C | polymer | 392 | 44241.4 | 1 | UniProt (P31412) Pfam (PF03223) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit C,V-ATPase 42 kDa subunit,Vacuolar proton pump subunit C |
8 | P | V-type proton ATPase subunit H | polymer | 478 | 54482.6 | 1 | UniProt (P41807) Pfam (PF03224) Pfam (PF11698) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit H,V-ATPase 54 kDa subunit,Vacuolar proton pump subunit H |
9 | Q | V-type proton ATPase subunit d | polymer | 345 | 39822.5 | 1 | UniProt (P32366) Pfam (PF01992) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d |
10 | R | V-type proton ATPase subunit c'' | polymer | 213 | 22610.6 | 1 | UniProt (P23968) Pfam (PF00137) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit c'',V-ATPase 22 kDa proteolipid subunit,Vacuolar proton pump c'' subunit |
11 | S | V-type proton ATPase subunit c' | polymer | 164 | 17046.4 | 1 | UniProt (P32842) Pfam (PF00137) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit c',Proteolipid protein VMA11,Trifluoperazine resistance protein 3,V-ATPase 16 kDa proteolipid subunit 2,Vacuolar proton pump c' subunit |
12 | T, U, V, W, X... | V-type proton ATPase subunit c | polymer | 160 | 16357.5 | 8 | UniProt (P25515) Pfam (PF00137) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit c,Guanine nucleotide exchange factor 2,V-ATPase 16 kDa proteolipid subunit 1,Vacuolar proton pump c subunit |
13 | b | V-type proton ATPase subunit a, vacuolar isoform | polymer | 840 | 95625.5 | 1 | UniProt (P32563) Pfam (PF01496) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase a 1 subunit,V-ATPase 95 kDa subunit,Vacuolar pH protein 1,Vacuolar proton pump a subunit,Vacuolar proton translocating ATPase subunit a 1 |
14 | c | V-type proton ATPase subunit e | polymer | 73 | 8387.1 | 1 | UniProt (Q3E7B6) Pfam (PF05493) In PDB | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | V-ATPase subunit e,Low dye-binding protein 10,Vacuolar proton pump subunit e |
15 | d | V-type proton ATPase subunit f | polymer | 54 | 4613.7 | 1 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||
16 | e, f, g | effector protein SidK | polymer | 573 | 65490.3 | 3 | UniProt (G8UUS6) In PDB | Legionella pneumophila subsp. pneumophila ATCC 43290 |
Sequence modifications
A, C, E: 1 - 283 (UniProt: P17255)
A, C, E: 738 - 1071 (UniProt: P17255)
e, f, g: 1 - 573 (UniProt: G8UUS6)
A, C, E: 738 - 1071 (UniProt: P17255)
e, f, g: 1 - 573 (UniProt: G8UUS6)
PDB | External Database | Details |
---|---|---|
Leu 89 | Gln 89 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 33 |
Total formula weight | 1151450.7 | |
All* | Total formula weight | 1151450.7 |