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5VMY

Kaiso (ZBTB33) zinc finger DNA binding domain in complex with a hemi CpG-methylated DNA resembling the specific Kaiso binding sequence (KBS)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Transcriptional regulator Kaisopolymer13416217.81UniProt (Q86T24)Homo sapiens (Human)Zinc finger and BTB domain-containing protein 33
2B
(D)
DNA (5'-D(*TP*GP*CP*TP*TP*CP*CP*(5CM)P*GP*(5CM)P*GP*AP*AP*TP*AP*AP*CP*G)-3')polymer185504.61synthetic construct
3C
(E)
DNA (5'-D(*CP*GP*TP*TP*AP*TP*TP*CP*GP*CP*GP*GP*GP*AP*AP*GP*CP*A)-3')polymer185556.61synthetic construct
4D, E, F
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
5G
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
6H, I, J
(A, D, E)
waterwater18.095Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight27279.0
Non-Polymers*Number of molecules4
Total formula weight231.7
All*Total formula weight27510.7
*Water molecules are not included.

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PDB entries from 2024-11-06

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