5VKU
An atomic structure of the human cytomegalovirus (HCMV) capsid with its securing layer of pp150 tegument protein
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (0, 1, 2, 3, 4...) | Tegument protein pp150 | polymer | 285 | 33232.4 | 15 | UniProt (P08318) | Human cytomegalovirus (strain AD169) (Human herpesvirus 5 strain AD169 HHV-5) | 150 kDa matrix phosphoprotein, 150 kDa phosphoprotein, pp150, Basic phosphoprotein, BPP, Phosphoprotein UL32, Tegument protein UL32 |
| 2 | K, L, M, N, O... (A, B, C, D, E...) | Major capsid protein | polymer | 1370 | 154048.9 | 16 | UniProt (P16729) Pfam (PF03122) | Human cytomegalovirus (strain AD169) (Human herpesvirus 5 strain AD169 HHV-5) | MCP |
| 3 | AA, BA, CA, DA, EA... (Q, R, S, T, U...) | Small capsomere-interacting protein | polymer | 75 | 8495.9 | 16 | UniProt (Q7M6N6) Pfam (PF17086) | Human cytomegalovirus (strain AD169) (Human herpesvirus 5 strain AD169 HHV-5) | Smallest capsid protein, SCP |
| 4 | CB, QA, TA, WA, ZA (g, j, m, p, s) | Triplex capsid protein 1 | polymer | 290 | 33071.3 | 5 | UniProt (P16783) Pfam (PF03327) | Human cytomegalovirus (strain AD169) (Human herpesvirus 5 strain AD169 HHV-5) | Triplex monomer protein, Tri1 |
| 5 | AB, BB, DB, EB, RA... (h, i, k, l, n...) | Triplex capsid protein 2 | polymer | 306 | 34635.8 | 10 | UniProt (P16728) Pfam (PF01802) | Human cytomegalovirus (strain AD169) (Human herpesvirus 5 strain AD169 HHV-5) | Triplex dimer protein, Tri2 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 62 |
| Total formula weight | 3610917.4 | |
| All* | Total formula weight | 3610917.4 |
