5VIF
Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit | polymer | 723 | 80974.5 | 1 | UniProt (O15294) Pfam (PF13424) Pfam (PF13414) Pfam (PF13844) | Homo sapiens (Human) | O-GlcNAc transferase subunit p110,O-linked N-acetylglucosamine transferase 110 kDa subunit,OGT |
| 2 | B (B) | CKII | polymer | 14 | 1398.6 | 1 | UniProt (by SIFTS) (P68400) | Homo sapiens | |
| 3 | C (A) | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 1 | Chemie (UDP) | |||
| 4 | D (B) | 2-{[(2E)-4-chlorobut-2-enoyl]amino}-2-deoxy-beta-D-glucopyranose | non-polymer | 281.7 | 1 | Chemie (9C1) | |||
| 5 | E, F (A, B) | water | water | 18.0 | 191 | Chemie (HOH) |
Sequence modifications
A: 313 - 1031 (UniProt: O15294)
| PDB | External Database | Details |
|---|---|---|
| Gly 309 | - | expression tag |
| Pro 310 | - | expression tag |
| Gly 311 | - | expression tag |
| Ser 312 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 82373.1 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 685.9 | |
| All* | Total formula weight | 83058.9 |
