5VI0
Pseudomonas fluorescens alkylpurine DNA glycosylase AlkC bound to DNA containing an abasic site analog
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | alkylpurine DNA glycosylase AlkC | polymer | 369 | 41735.4 | 2 | UniProt (C3K795) Pfam (PF08713) In PDB | Pseudomonas fluorescens | |
2 | C, F | DNA (5'-D(*TP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*T)-3') | polymer | 11 | 3191.1 | 2 | synthetic construct | ||
3 | D, E | DNA (5'-D(*AP*AP*GP*AP*CP*TP*TP*GP*GP*AP*C)-3') | polymer | 11 | 3382.2 | 2 | synthetic construct | ||
4 | A | polyethylene glycol | non-polymer | 662.8 | 1 | Chemie (P4K) | |||
5 | B | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
6 | water | water | 18.0 | 529 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 365 (UniProt: C3K795)
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Pro -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 96617.4 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 685.8 | |
All* | Total formula weight | 97303.2 |