5VI0
Pseudomonas fluorescens alkylpurine DNA glycosylase AlkC bound to DNA containing an abasic site analog
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | alkylpurine DNA glycosylase AlkC | polymer | 369 | 41735.4 | 2 | UniProt (C3K795) Pfam (PF08713) | Pseudomonas fluorescens | |
| 2 | C, F (C, F) | DNA (5'-D(*TP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*T)-3') | polymer | 11 | 3191.1 | 2 | synthetic construct | ||
| 3 | D, E (D, E) | DNA (5'-D(*AP*AP*GP*AP*CP*TP*TP*GP*GP*AP*C)-3') | polymer | 11 | 3382.2 | 2 | synthetic construct | ||
| 4 | G (A) | polyethylene glycol | non-polymer | 662.8 | 1 | Chemie (P4K) | |||
| 5 | H (B) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 6 | I, J, K, L, M... (A, B, C, D, E...) | water | water | 18.0 | 529 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 365 (UniProt: C3K795)
| PDB | External Database | Details |
|---|---|---|
| Gly -3 | - | expression tag |
| Pro -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 96617.4 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 685.8 | |
| All* | Total formula weight | 97303.2 |
