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5V9J

Crystal structure of catalytic domain of GLP with MS0105

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Histone-lysine N-methyltransferase EHMT1polymer28732974.32UniProt (Q9H9B1)
Pfam (PF05033)
Pfam (PF00856)
Homo sapiens (Human)Euchromatic histone-lysine N-methyltransferase 1,Eu-HMTase1,G9a-like protein 1,GLP1,Histone H3-K9 methyltransferase 5,H3-K9-HMTase 5,Lysine N-methyltransferase 1D
2C, R
(A, B)
S-ADENOSYLMETHIONINEnon-polymer398.42Chemie (SAM)
3D, S
(A, B)
N~2~-cyclohexyl-N~4~-(1-ethylpiperidin-4-yl)-6,7-dimethoxy-N~2~-methylquinazoline-2,4-diaminenon-polymer427.62Chemie (90P)
4E, F, G, H, T...
(A, B)
ZINC IONnon-polymer65.48Chemie (ZN)
5I, J, X
(A, B)
CHLORIDE IONnon-polymer35.53Chemie (CL)
6AA, BA, CA, DA, EA...
(B, A)
UNKNOWN ATOM OR IONnon-polymer13Chemie (UNX)
7Y
(B)
DIMETHYL SULFOXIDEnon-polymer78.11Chemie (DMS)
8FA, GA
(A, B)
waterwater18.0631Chemie (HOH)
Sequence modifications
A, B: 982 - 1266 (UniProt: Q9H9B1)
PDBExternal DatabaseDetails
Gly 980-expression tag
Ser 981-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight65948.7
Non-Polymers*Number of molecules29
Total formula weight2359.8
All*Total formula weight68308.5
*Water molecules are not included.

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PDB entries from 2026-02-25

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