5V9H
Structure of the H477R variant of rat cytosolic PEPCK in complex with phosphoglycolate and GDP.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | polymer | 622 | 69518.7 | 2 | UniProt (P07379) Pfam (PF17297) Pfam (PF00821) | Rattus norvegicus (Rat) | PEPCK-C |
| 2 | C (A) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 1 | Chemie (1PE) | |||
| 3 | D, E, F, J, K... (A, B) | MANGANESE (II) ION | non-polymer | 54.9 | 6 | Chemie (MN) | |||
| 4 | G, M (A, B) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 5 | H, N (A, B) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 2 | Chemie (GDP) | |||
| 6 | I, O (A, B) | 2-PHOSPHOGLYCOLIC ACID | non-polymer | 156.0 | 2 | Chemie (PGA) | |||
| 7 | P, Q (A, B) | water | water | 18.0 | 290 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 622 (UniProt: P07379)
| PDB | External Database | Details |
|---|---|---|
| Arg 477 | His 477 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 139037.4 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 1812.3 | |
| All* | Total formula weight | 140849.8 |
