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5V86

Structure of DCN1 bound to NAcM-OPT

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ALysozyme,DCN1-like protein 1polymer38444177.21UniProt (D9IEF7)
UniProt (Q96GG9)
Pfam (PF00959)
Pfam (PF03556)
UniProt (by SIFTS) (P00720)
In PDB
Enterobacteria phage T4DCUN1 domain-containing protein 1,Defective in cullin neddylation protein 1-like protein 1,Squamous cell carcinoma-related oncogene
2AN-benzyl-N-(1-butylpiperidin-4-yl)-N'-(3,4-dichlorophenyl)ureanon-polymer434.41Chemie (8ZA)
3waterwater18.0581Chemie (HOH)
Sequence modifications
A: 1 - 164 (UniProt: D9IEF7)
PDBExternal DatabaseDetails
Met -21-initiating methionine
Gly -20-expression tag
Ser -19-expression tag
Ser -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
Ser -11-expression tag
Gln -10-expression tag
Asp -9-expression tag
Leu -8-expression tag
Glu -7-expression tag
Asn -6-expression tag
Leu -5-expression tag
Tyr -4-expression tag
Phe -3-expression tag
Gln -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Thr 54Cys 54conflict
Ala 97Cys 97conflict
Ala 127Asp 127engineered mutation
Thr 146Ala 146conflict
Ala 154Arg 154engineered mutation
A: 1062 - 1259 (UniProt: Q96GG9)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight44177.2
Non-Polymers*Number of molecules1
Total formula weight434.4
All*Total formula weight44611.6
*Water molecules are not included.

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PDB entries from 2024-07-24

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