5V7V
Cryo-EM structure of ERAD-associated E3 ubiquitin-protein ligase component HRD3
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | ERAD-associated E3 ubiquitin-protein ligase component HRD3 | polymer | 818 | 93759.2 | 1 | UniProt (Q05787) Pfam (PF08238) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | HMG-CoA reductase degradation protein 3 |
| 2 | B, C (B, C) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
| 3 | D, E, F (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) |
Sequence modifications
A: 1 - 767 (UniProt: Q05787)
| PDB | External Database | Details |
|---|---|---|
| Gly 768 | - | expression tag |
| Gly 769 | - | expression tag |
| Gly 770 | - | expression tag |
| Glu 771 | - | expression tag |
| Asn 772 | - | expression tag |
| Leu 773 | - | expression tag |
| Tyr 774 | - | expression tag |
| Phe 775 | - | expression tag |
| Gln 776 | - | expression tag |
| Ser 777 | - | expression tag |
| Gly 778 | - | expression tag |
| Gly 779 | - | expression tag |
| Gly 780 | - | expression tag |
| Met 781 | - | expression tag |
| Asp 782 | - | expression tag |
| Glu 783 | - | expression tag |
| Lys 784 | - | expression tag |
| Thr 785 | - | expression tag |
| Thr 786 | - | expression tag |
| Gly 787 | - | expression tag |
| Trp 788 | - | expression tag |
| Arg 789 | - | expression tag |
| Gly 790 | - | expression tag |
| Gly 791 | - | expression tag |
| His 792 | - | expression tag |
| Val 793 | - | expression tag |
| Val 794 | - | expression tag |
| Glu 795 | - | expression tag |
| Gly 796 | - | expression tag |
| Leu 797 | - | expression tag |
| Ala 798 | - | expression tag |
| Gly 799 | - | expression tag |
| Glu 800 | - | expression tag |
| Leu 801 | - | expression tag |
| Glu 802 | - | expression tag |
| Gln 803 | - | expression tag |
| Leu 804 | - | expression tag |
| Arg 805 | - | expression tag |
| Ala 806 | - | expression tag |
| Arg 807 | - | expression tag |
| Leu 808 | - | expression tag |
| Glu 809 | - | expression tag |
| His 810 | - | expression tag |
| His 811 | - | expression tag |
| Pro 812 | - | expression tag |
| Gln 813 | - | expression tag |
| Gly 814 | - | expression tag |
| Gln 815 | - | expression tag |
| Arg 816 | - | expression tag |
| Glu 817 | - | expression tag |
| Pro 818 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 93759.2 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1173.1 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 663.6 | |
| All* | Total formula weight | 95595.9 |
