5V6D
Crystal structure of nucleoside diphosphate kinase from Neisseria gonorrhoeae in complex with citrate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... (A, B, C, D, E...) | Nucleoside diphosphate kinase | polymer | 149 | 16488.9 | 16 | UniProt (B4RMG0) Pfam (PF00334) | Neisseria gonorrhoeae NCCP11945 | NDP kinase, Nucleoside-2-P kinase |
2 | AA, AB, CA, EA, HA... (E, P, F, G, H...) | CITRIC ACID | non-polymer | 192.1 | 16 | Chemie (CIT) | |||
3 | BA, BB, DA, FA, GA... (E, P, F, G, H...) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 22 | Chemie (EDO) | |||
4 | CB, DB, EB, FB, GB... (A, B, C, D, E...) | water | water | 18.0 | 2219 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P: 1 - 141 (UniProt: B4RMG0)
PDB | External Database | Details |
---|---|---|
Met -7 | - | expression tag |
Ala -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 16 |
Total formula weight | 263821.6 | |
Non-Polymers* | Number of molecules | 38 |
Total formula weight | 4439.5 | |
All* | Total formula weight | 268261.1 |