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5V4K

Crystal structure of NEDD4 LIR-fused human LC3B_2-119

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Microtubule-associated proteins 1A/1B light chain 3B,Microtubule-associated proteins 1A/1B light chain 3B,Microtubule-associated proteins 1A/1B light chain 3Bpolymer13215466.62UniProt (Q9GZQ8)
Pfam (PF02991)
Homo sapiens (Human)Autophagy-related protein LC3 B,Autophagy-related ubiquitin-like modifier LC3 B,MAP1 light chain 3-like protein 2,MAP1A/MAP1B light chain 3 B,MAP1A/MAP1B LC3 B,Microtubule-associated protein 1 light chain 3 beta,Autophagy-related protein LC3 B,Autophagy-related ubiquitin-like modifier LC3 B,MAP1 light chain 3-like protein 2,MAP1A/MAP1B light chain 3 B,MAP1A/MAP1B LC3 B,Microtubule-associated protein 1 light chain 3 beta,Autophagy-related protein LC3 B,Autophagy-related ubiquitin-like modifier LC3 B,MAP1 light chain 3-like protein 2,MAP1A/MAP1B light chain 3 B,MAP1A/MAP1B LC3 B,Microtubule-associated protein 1 light chain 3 beta
2C, E
(A, B)
GLYCEROLnon-polymer92.12Chemie (GOL)
3D, F
(A, B)
SULFATE IONnon-polymer96.12Chemie (SO4)
4G, H
(A, B)
waterwater18.0135Chemie (HOH)
Sequence modifications
A, B: 258 - 271 (PDB: 5V4K)
A, B: 1002 - 1119 (UniProt: Q9GZQ8)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight30933.1
Non-Polymers*Number of molecules4
Total formula weight376.3
All*Total formula weight31309.4
*Water molecules are not included.

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PDB entries from 2026-02-04

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