5V2S
Crystal structure of glycoprotein B from Herpes Simplex Virus type I
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Envelope glycoprotein B | polymer | 841 | 94501.5 | 1 | UniProt (A1Z0P7) Pfam (PF17416) Pfam (PF17417) Pfam (PF00606) UniProt (by SIFTS) (P10211) | Human herpesvirus 1 (HHV-1) | Glycoprotein B |
| 2 | B, C (B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 3 | D (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
A: 72 - 904 (UniProt: A1Z0P7)
| PDB | External Database | Details |
|---|---|---|
| Gly 905 | - | expression tag |
| Ser 906 | - | expression tag |
| His 907 | - | expression tag |
| His 908 | - | expression tag |
| His 909 | - | expression tag |
| His 910 | - | expression tag |
| His 911 | - | expression tag |
| His 912 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 94501.5 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 848.8 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 221.2 | |
| All* | Total formula weight | 95571.5 |






