5U38
Crystal structure of native lectin from Platypodium elegans seeds (PELa) complexed with Man1-3Man-OMe.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Lectin | polymer | 239 | 26730.5 | 1 | UniProt (G1EUI6) Pfam (PF00139) | Platypodium elegans | |
| 2 | B (B) | alpha-D-mannopyranose-(1-3)-methyl alpha-D-mannopyranoside | branched | 356.3 | 1 | In PDB GlyTouCan (G59594NN) | |||
| 3 | C (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 4 | D (A) | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) | |||
| 5 | E (A) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 6 | F (A) | water | water | 18.0 | 295 | Chemie (HOH) |
Sequence modifications
A: 1 - 239 (UniProt: G1EUI6)
| PDB | External Database | Details |
|---|---|---|
| Phe 70 | Leu 78 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 26730.5 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 356.3 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 316.2 | |
| All* | Total formula weight | 27403.1 |
