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5U2R

PRECATALYTIC TERNARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH GAPPED DNA SUBSTARTE, INCOMING L-DCTP AND CA2+

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ADNA polymerase betapolymer34339258.81UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
In PDB
Homo sapiens (Human)
2T16- MER TEMPLATEpolymer164869.21synthetic construct
3P10- MER PRIMERpolymer103061.01synthetic construct
4D5-MER PHOSPHORYLATED DOWNSTREAM PRIMERpolymer51536.01synthetic construct
5A4-amino-1-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-L-erythro-pentofuranosyl}pyrimidin-2(1H)-onenon-polymer467.21Chemie (1S0)
6ACALCIUM IONnon-polymer40.12Chemie (CA)
7ASODIUM IONnon-polymer23.02Chemie (NA)
8AACETATE IONnon-polymer59.03Chemie (ACT)
9waterwater18.0286Chemie (HOH)
Sequence modifications
A: 1 - 335 (UniProt: P06746)
PDBExternal DatabaseDetails
Met -1-initiating methionine
Gly 0-expression tag
His 336-expression tag
His 337-expression tag
His 338-expression tag
His 339-expression tag
His 340-expression tag
His 341-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight48725.0
Non-Polymers*Number of molecules8
Total formula weight770.4
All*Total formula weight49495.4
*Water molecules are not included.

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PDB entries from 2024-07-24

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