5TZD
Structure of the WT S. venezulae BldD-(CTD-c-di-GMP)2 assembly intermediate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | J, B, C, A | DNA-binding protein | polymer | 91 | 10175.4 | 4 | UniProt (F2RCL8) Pfam (PF21179) In PDB | Streptomyces venezuelae | |
2 | J, C | 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) | non-polymer | 690.4 | 4 | Chemie (C2E) | |||
3 | water | water | 18.0 | 312 | Chemie (HOH) |
Sequence modifications
J, B, C, A: 80 - 166 (UniProt: F2RCL8)
PDB | External Database | Details |
---|---|---|
Gly 76 | - | expression tag |
Ser 77 | - | expression tag |
His 78 | - | expression tag |
Met 79 | - | expression tag |
Met 92 | Leu 92 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 40701.7 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 2761.6 | |
All* | Total formula weight | 43463.3 |