5TJO
Crystal structure of GTB + B trisaccharide (mercury derivative)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Histo-blood group ABO system transferase | polymer | 297 | 34526.8 | 1 | UniProt (P16442) Pfam (PF03414) | Homo sapiens (Human) | Fucosylglycoprotein 3-alpha-galactosyltransferase,Fucosylglycoprotein alpha-N-acetylgalactosaminyltransferase,Glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase,Glycoprotein-fucosylgalactoside alpha-galactosyltransferase,Histo-blood group A transferase,A transferase,Histo-blood group B transferase,B transferase,NAGAT |
| 2 | B (B) | alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]octyl beta-D-galactopyranoside | branched | 600.7 | 1 | In PDB GlyTouCan (G14463NF) | |||
| 3 | C, D, E, F, G... (A) | MERCURY (II) ION | non-polymer | 200.6 | 6 | Chemie (HG) | |||
| 4 | I (A) | water | water | 18.0 | 200 | Chemie (HOH) |
Sequence modifications
A: 64 - 354 (UniProt: P16442)
| PDB | External Database | Details |
|---|---|---|
| Ala 58 | - | expression tag |
| Ile 59 | - | expression tag |
| Gly 60 | - | expression tag |
| Glu 61 | - | expression tag |
| Phe 62 | - | expression tag |
| Met 63 | - | expression tag |
| Gly 176 | Arg 176 | conflict |
| Ser 235 | Gly 235 | conflict |
| Met 266 | Leu 266 | conflict |
| Ala 268 | Gly 268 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 34526.8 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 600.7 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 1203.5 | |
| All* | Total formula weight | 36331.0 |
