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5THS

Crystal Structure of G302A HDAC8 in complex with M344

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Histone deacetylase 8polymer38943246.02UniProt (Q9BY41)
Pfam (PF00850)
Homo sapiens (Human)HD8
2C, N
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
3D, E, O, P
(A, B)
POTASSIUM IONnon-polymer39.14Chemie (K)
4F, Q
(A, B)
4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamidenon-polymer307.42Chemie (B3N)
5G, H, I, J, K...
(A, B)
1,2-ETHANEDIOLnon-polymer62.113Chemie (EDO)
6X, Y
(A, B)
waterwater18.0301Chemie (HOH)
Sequence modifications
A, B: 1 - 377 (UniProt: Q9BY41)
PDBExternal DatabaseDetails
Ala 302Gly 302engineered mutation
Ile 378-expression tag
Glu 379-expression tag
Gly 380-expression tag
Arg 381-expression tag
Gly 382-expression tag
Ser 383-expression tag
His 384-expression tag
His 385-expression tag
His 386-expression tag
His 387-expression tag
His 388-expression tag
His 389-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight86492.0
Non-Polymers*Number of molecules21
Total formula weight1708.9
All*Total formula weight88200.9
*Water molecules are not included.

246333

PDB entries from 2025-12-17

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