5T6S
Crystal structure of the A/Shanghai/2/2013 (H7N9) influenza virus hemagglutinin in complex with the antiviral drug arbidol
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E, G, I... | Hemagglutinin HA1 | polymer | 321 | 34993.6 | 6 | UniProt (R4NN21) Pfam (PF00509) In PDB | Influenza A virus | |
2 | B, D, F, H, J... | Hemagglutinin HA2 | polymer | 183 | 21081.2 | 6 | UniProt (R4NN21) Pfam (PF00509) In PDB | Influenza A virus | |
3 | M, N, Q, R, S | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 5 | In PDB GlyTouCan (G15407YE) | |||
4 | O, P | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
5 | D, E, F, H, I... | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 15 | Chemie (NAG) | |||
6 | F, H, J, L, B | ethyl 6-bromo-4-[(dimethylamino)methyl]-5-hydroxy-1-methyl-2-[(phenylsulfanyl)methyl]-1H-indole-3-carboxylate | non-polymer | 477.4 | 6 | Chemie (75U) | |||
7 | J | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
8 | water | water | 18.0 | 988 | Chemie (HOH) |
Sequence modifications
B, D, F, H, J, L: 1 - 176 (UniProt: R4NN21)
PDB | External Database | Details |
---|---|---|
Ser 177 | - | expression tag |
Gly 178 | - | expression tag |
Arg 179 | - | expression tag |
Leu 180 | - | expression tag |
Val 181 | - | expression tag |
Pro 182 | - | expression tag |
Arg 183 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 336448.6 | |
Branched | Number of molecules | 7 |
Total formula weight | 3781.5 | |
Non-Polymers* | Number of molecules | 22 |
Total formula weight | 6205.6 | |
All* | Total formula weight | 346435.7 |