5SDK
PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z416341642
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Asp/Glu-specific dipeptidyl-peptidase | polymer | 707 | 80753.4 | 2 | UniProt (B2RID1) Pfam (PF10459) | Porphyromonas gingivalis | Dipeptidyl-peptidase 11,DPP11 |
| 2 | C, F (A, B) | (2S)-N,2-dimethyl-N-(propan-2-yl)morpholine-4-sulfonamide | non-polymer | 236.3 | 2 | Chemie (I87) | |||
| 3 | D, E, G (A, B) | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
| 4 | H, I (A, B) | water | water | 18.0 | 265 | Chemie (HOH) |
Sequence modifications
A, B: 22 - 720 (UniProt: B2RID1)
| PDB | External Database | Details |
|---|---|---|
| Met 21 | - | initiating methionine |
| Ala 721 | - | expression tag |
| His 722 | - | expression tag |
| His 723 | - | expression tag |
| His 724 | - | expression tag |
| His 725 | - | expression tag |
| His 726 | - | expression tag |
| His 727 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 161506.8 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 579.0 | |
| All* | Total formula weight | 162085.8 |
