5S9L
AUTOTAXIN, 4-[3-Oxo-3-(2-oxo-2,3-dihydro-benzooxazol-6-yl)-propyl]-piperazine-1-carboxylic acid 3,5-dichloro-benzyl ester, 1.90A, P212121, Rfree=19.1%
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Isoform 2 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 | polymer | 846 | 97343.3 | 1 | UniProt (Q64610) Pfam (PF01033) Pfam (PF01663) Pfam (PF01223) In PDB | Rattus norvegicus (Rat) | E-NPP 2,Autotaxin,Extracellular lysophospholipase D,LysoPLD |
2 | B | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1397.2 | 1 | In PDB | |||
3 | A | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
4 | A | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
5 | A | ACETATE ION | non-polymer | 59.0 | 3 | Chemie (ACT) | |||
6 | A | (3,5-dichlorophenyl)methyl 4-[3-oxo-3-(2-oxo-2,3-dihydro-1,3-benzoxazol-6-yl)propyl]piperazine-1-carboxylate | non-polymer | 478.3 | 1 | Chemie (6ZO) | |||
7 | A | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
8 | A | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
9 | water | water | 18.0 | 509 | Chemie (HOH) |
Sequence modifications
A: 28 - 862 (UniProt: Q64610)
PDB | External Database | Details |
---|---|---|
Ala 53 | Asn 53 | engineered mutation |
Ala 410 | Asn 410 | engineered mutation |
Thr 591 | Arg 591 | engineered mutation |
Gly 863 | - | expression tag |
Gly 864 | - | expression tag |
Arg 865 | - | expression tag |
His 866 | - | expression tag |
His 867 | - | expression tag |
His 868 | - | expression tag |
His 869 | - | expression tag |
His 870 | - | expression tag |
His 871 | - | expression tag |
His 872 | - | expression tag |
His 873 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 97343.3 | |
Branched | Number of molecules | 1 |
Total formula weight | 1397.2 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 863.1 | |
All* | Total formula weight | 99603.7 |