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5S9L

AUTOTAXIN, 4-[3-Oxo-3-(2-oxo-2,3-dihydro-benzooxazol-6-yl)-propyl]-piperazine-1-carboxylic acid 3,5-dichloro-benzyl ester, 1.90A, P212121, Rfree=19.1%

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AIsoform 2 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 2polymer84697343.31UniProt (Q64610)
Pfam (PF01033)
Pfam (PF01663)
Pfam (PF01223)
In PDB
Rattus norvegicus (Rat)E-NPP 2,Autotaxin,Extracellular lysophospholipase D,LysoPLD
2Balpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1397.21In PDB
3ACALCIUM IONnon-polymer40.12Chemie (CA)
4APOTASSIUM IONnon-polymer39.11Chemie (K)
5AACETATE IONnon-polymer59.03Chemie (ACT)
6A(3,5-dichlorophenyl)methyl 4-[3-oxo-3-(2-oxo-2,3-dihydro-1,3-benzoxazol-6-yl)propyl]piperazine-1-carboxylatenon-polymer478.31Chemie (6ZO)
7AZINC IONnon-polymer65.41Chemie (ZN)
8ASODIUM IONnon-polymer23.01Chemie (NA)
9waterwater18.0509Chemie (HOH)
Sequence modifications
A: 28 - 862 (UniProt: Q64610)
PDBExternal DatabaseDetails
Ala 53Asn 53engineered mutation
Ala 410Asn 410engineered mutation
Thr 591Arg 591engineered mutation
Gly 863-expression tag
Gly 864-expression tag
Arg 865-expression tag
His 866-expression tag
His 867-expression tag
His 868-expression tag
His 869-expression tag
His 870-expression tag
His 871-expression tag
His 872-expression tag
His 873-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight97343.3
BranchedNumber of molecules1
Total formula weight1397.2
Non-Polymers*Number of molecules9
Total formula weight863.1
All*Total formula weight99603.7
*Water molecules are not included.

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PDB entries from 2024-07-24

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