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5QTS

PanDDA analysis group deposition -- Crystal Structure of NUDT5 in complex with 8J-537S

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
ADP-sugar pyrophosphatasepolymer20923136.14UniProt (Q9UKK9)
Pfam (PF00293)
Homo sapiens (Human)8-oxo-dGDP phosphatase, Nuclear ATP-synthesis protein NUDIX5, Nucleoside diphosphate-linked moiety X motif 5, hNUDT5, YSA1H
2E, F, N, O, R...
(A, B, C, D)
MAGNESIUM IONnon-polymer24.38Chemie (MG)
3G
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
4H, L, T, V
(A, C, D)
3-methyl-2-(methylsulfanyl)-6-(trifluoromethyl)pyrimidin-4(3H)-onenon-polymer224.24Chemie (PWS)
5I, J, K, M, P...
(A, B, C, D)
1,2-ETHANEDIOLnon-polymer62.18Chemie (EDO)
6AA, BA, CA, Z
(B, C, D, A)
waterwater18.0265Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 208 (UniProt: Q9UKK9)
PDBExternal DatabaseDetails
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight92544.3
Non-Polymers*Number of molecules21
Total formula weight1623.2
All*Total formula weight94167.6
*Water molecules are not included.

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PDB entries from 2026-02-04

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