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5QKA

PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of NUDT5 in complex with Z2377835233

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, DADP-sugar pyrophosphatasepolymer20923136.14UniProt (Q9UKK9)
Pfam (PF00293)
In PDB
Homo sapiens (Human)8-oxo-dGDP phosphatase,Nuclear ATP-synthesis protein NUDIX5,Nucleoside diphosphate-linked moiety X motif 5,hNUDT5,YSA1H
2A, B, C, DMAGNESIUM IONnon-polymer24.38Chemie (MG)
3ACHLORIDE IONnon-polymer35.51Chemie (CL)
4A1-methyl-3-[(3R)-piperidin-3-yl]-1H-pyrazole-4-carboxamidenon-polymer208.31Chemie (K3Y)
5A, B, C1,2-ETHANEDIOLnon-polymer62.14Chemie (EDO)
6waterwater18.0230Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 208 (UniProt: Q9UKK9)
PDBExternal DatabaseDetails
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight92544.3
Non-Polymers*Number of molecules14
Total formula weight686.4
All*Total formula weight93230.7
*Water molecules are not included.

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PDB entries from 2024-06-26

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