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5QK9

PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of NUDT5 in complex with Z102895082

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
ADP-sugar pyrophosphatasepolymer20923136.14UniProt (Q9UKK9)
Pfam (PF00293)
Homo sapiens (Human)8-oxo-dGDP phosphatase,Nuclear ATP-synthesis protein NUDIX5,Nucleoside diphosphate-linked moiety X motif 5,hNUDT5,YSA1H
2E, F, K, L, O...
(A, B, C, D)
MAGNESIUM IONnon-polymer24.38Chemie (MG)
3G, M, Q, R
(A, B, C)
7,8-dimethoxyphthalazin-1(2H)-onenon-polymer206.24Chemie (K3V)
4H, J, N, S, V
(A, B, C, D)
1,2-ETHANEDIOLnon-polymer62.15Chemie (EDO)
5I
(B)
CHLORIDE IONnon-polymer35.51Chemie (CL)
6W, X, Y, Z
(A, B, C, D)
waterwater18.0287Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 208 (UniProt: Q9UKK9)
PDBExternal DatabaseDetails
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight92544.3
Non-Polymers*Number of molecules18
Total formula weight1365.0
All*Total formula weight93909.3
*Water molecules are not included.

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PDB entries from 2025-07-23

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