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5QJ4

PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of NUDT5 in complex with Z1827602749

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, DADP-sugar pyrophosphatasepolymer20923136.14UniProt (Q9UKK9)
Pfam (PF00293)
In PDB
Homo sapiens (Human)8-oxo-dGDP phosphatase,Nuclear ATP-synthesis protein NUDIX5,Nucleoside diphosphate-linked moiety X motif 5,hNUDT5,YSA1H
2A, B, C, DMAGNESIUM IONnon-polymer24.38Chemie (MG)
3A, B, C(2S,3S)-3-methyl-N-(1,2,3-thiadiazol-5-yl)tetrahydrofuran-2-carboxamide (non-preferred name)non-polymer213.34Chemie (K04)
4A, B, C, D1,2-ETHANEDIOLnon-polymer62.15Chemie (EDO)
5BCHLORIDE IONnon-polymer35.51Chemie (CL)
6waterwater18.0253Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 208 (UniProt: Q9UKK9)
PDBExternal DatabaseDetails
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight92544.3
Non-Polymers*Number of molecules18
Total formula weight1393.3
All*Total formula weight93937.6
*Water molecules are not included.

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PDB entries from 2024-07-10

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