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5QIX

Covalent fragment group deposition -- Crystal Structure of OUTB2 in complex with PCM-0103007

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Ubiquitin thioesterase OTUB2polymer22526362.01UniProt (Q96DC9)
Pfam (PF10275)
Homo sapiens (Human)Deubiquitinating enzyme OTUB2,OTU domain-containing ubiquitin aldehyde-binding protein 2,Otubain-2,Ubiquitin-specific-processing protease OTUB2
2B
(A)
N-(3-phenylprop-2-yn-1-yl)acetamidenon-polymer173.21Chemie (J5V)
3C, D, E, F, G...
(A)
1,2-ETHANEDIOLnon-polymer62.17Chemie (EDO)
4J, K, L
(A)
UNKNOWN LIGANDnon-polymer3Chemie (UNL)
5M
(A)
waterwater18.0256Chemie (HOH)
Sequence modifications
A: 6 - 230 (UniProt: Q96DC9)
PDBExternal DatabaseDetails
Arg 49Gly 49conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight26362.0
Non-Polymers*Number of molecules11
Total formula weight607.7
All*Total formula weight26969.7
*Water molecules are not included.

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PDB entries from 2026-01-14

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