5OYD
GH5 endo-xyloglucanase from Cellvibrio japonicus
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Cellulase, putative, cel5D | polymer | 396 | 44396.2 | 2 | UniProt (B3PD52) Pfam (PF00150) In PDB | Cellvibrio japonicus | |
2 | C | beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-N-acetyl-beta-D-glucopyranosylamine | branched | 971.9 | 1 | In PDB GlyTouCan (G81585VK) | |||
3 | D | alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-N-acetyl-beta-D-glucopyranosylamine | branched | 1104.0 | 1 | In PDB GlyTouCan (G18905CN) | |||
4 | A, B | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) | |||
5 | A, B | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
6 | B | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
7 | water | water | 18.0 | 186 | Chemie (HOH) |
Sequence modifications
A, B: 96 - 468 (UniProt: B3PD52)
PDB | External Database | Details |
---|---|---|
Met 73 | - | initiating methionine |
Gly 74 | - | expression tag |
Ser 75 | - | expression tag |
Ser 76 | - | expression tag |
His 77 | - | expression tag |
His 78 | - | expression tag |
His 79 | - | expression tag |
His 80 | - | expression tag |
His 81 | - | expression tag |
His 82 | - | expression tag |
Ser 83 | - | expression tag |
Ser 84 | - | expression tag |
Gly 85 | - | expression tag |
Leu 86 | - | expression tag |
Val 87 | - | expression tag |
Pro 88 | - | expression tag |
Arg 89 | - | expression tag |
Gly 90 | - | expression tag |
Ser 91 | - | expression tag |
His 92 | - | expression tag |
Met 93 | - | expression tag |
Ala 94 | - | expression tag |
Ser 95 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 88792.4 | |
Branched | Number of molecules | 2 |
Total formula weight | 2075.8 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 627.4 | |
All* | Total formula weight | 91495.6 |