5OY0
Structure of synechocystis photosystem I trimer at 2.5A resolution
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, a | Photosystem I P700 chlorophyll a apoprotein A1 | polymer | 751 | 83036.4 | 2 | UniProt (P29254) Pfam (PF00223) In PDB | Synechocystis sp. PCC 6803 | PsaA |
2 | B, 2 | Photosystem I P700 chlorophyll a apoprotein A2 | polymer | 731 | 81369.5 | 2 | UniProt (P29255) Pfam (PF00223) In PDB | Synechocystis sp. PCC 6803 | PsaB |
3 | C, 3 | Photosystem I iron-sulfur center | polymer | 80 | 8706.1 | 2 | UniProt (P32422) Pfam (PF12838) In PDB | Synechocystis sp. PCC 6803 | 9 kDa polypeptide,PSI-C,Photosystem I subunit VII,PsaC |
4 | D, d | Photosystem I reaction center subunit II | polymer | 141 | 15663.7 | 2 | UniProt (P19569) Pfam (PF02531) In PDB | Synechocystis sp. PCC 6803 | Photosystem I 16 kDa polypeptide,PSI-D |
5 | E, 5 | Photosystem I reaction center subunit IV | polymer | 69 | 7680.5 | 2 | UniProt (P12975) Pfam (PF02427) In PDB | Synechocystis sp. PCC 6803 | Photosystem I 8.1 kDa protein,p30 protein |
6 | F, f, 6 | Photosystem I reaction center subunit III | polymer | 143 | 15791.1 | 3 | UniProt (P29256) Pfam (PF02507) In PDB | Synechocystis sp. PCC 6803 | PSI-F |
7 | I, i | Photosystem I reaction center subunit VIII | polymer | 40 | 4414.1 | 2 | UniProt (Q55330) Pfam (PF00796) In PDB | Synechocystis sp. PCC 6803 | |
8 | J, j, 7 | Photosystem I reaction center subunit IX | polymer | 40 | 4535.4 | 3 | UniProt (Q55329) Pfam (PF01701) In PDB | Synechocystis sp. PCC 6803 | |
9 | K | Photosystem I reaction center subunit PsaK 2 | polymer | 80 | 8237.8 | 1 | UniProt (P74564) Pfam (PF01241) In PDB | Synechocystis sp. PCC 6803 | Photosystem I subunit X 2 |
10 | L, l | Photosystem I reaction center subunit XI | polymer | 157 | 16631.8 | 2 | UniProt (P37277) Pfam (PF02605) In PDB | Synechocystis sp. PCC 6803 | PSI subunit V,PSI-L |
11 | M, m, 9 | Photosystem I reaction center subunit XII | polymer | 31 | 3382.1 | 3 | UniProt (P72986) Pfam (PF07465) In PDB | Synechocystis sp. PCC 6803 | PSI-M |
12 | b | Photosystem I P700 chlorophyll a apoprotein A2 | polymer | 729 | 81167.3 | 1 | UniProt (P29255) Pfam (PF00223) In PDB | Synechocystis sp. PCC 6803 | PsaB |
13 | c | Photosystem I iron-sulfur center | polymer | 81 | 8837.3 | 1 | UniProt (P32422) Pfam (PF12838) In PDB | Synechocystis sp. PCC 6803 | 9 kDa polypeptide,PSI-C,Photosystem I subunit VII,PsaC |
14 | e | Photosystem I reaction center subunit IV | polymer | 68 | 7552.4 | 1 | UniProt (P12975) Pfam (PF02427) In PDB | Synechocystis sp. PCC 6803 | Photosystem I 8.1 kDa protein,p30 protein |
15 | k | Photosystem I reaction center subunit PsaK 2 | polymer | 78 | 8037.5 | 1 | UniProt (P74564) Pfam (PF01241) In PDB | Synechocystis sp. PCC 6803 | Photosystem I subunit X 2 |
16 | 1 | Photosystem I P700 chlorophyll a apoprotein A1 | polymer | 744 | 82280.5 | 1 | UniProt (P29254) Pfam (PF00223) In PDB | Synechocystis sp. PCC 6803 | PsaA |
17 | 4 | Photosystem I reaction center subunit II | polymer | 140 | 15532.6 | 1 | UniProt (P19569) Pfam (PF02531) In PDB | Synechocystis sp. PCC 6803 | Photosystem I 16 kDa polypeptide,PSI-D |
18 | h | Photosystem I reaction center subunit VIII | polymer | 38 | 4228.0 | 1 | UniProt (Q55330) Pfam (PF00796) In PDB | Synechocystis sp. PCC 6803 | |
19 | 8 | Photosystem I reaction center subunit PsaK 2 | polymer | 79 | 8124.6 | 1 | UniProt (P74564) Pfam (PF01241) In PDB | Synechocystis sp. PCC 6803 | Photosystem I subunit X 2 |
20 | 0 | Photosystem I reaction center subunit XI | polymer | 154 | 16300.4 | 1 | UniProt (P37277) Pfam (PF02605) In PDB | Synechocystis sp. PCC 6803 | PSI subunit V,PSI-L |
21 | A, B, a, b, 1... | CHLOROPHYLL A | non-polymer | 893.5 | 285 | Chemie (CLA) | |||
22 | b, B, 1, a, 2... | PHYLLOQUINONE | non-polymer | 450.7 | 6 | Chemie (PQN) | |||
23 | C, 3, 1, a, c... | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 9 | Chemie (SF4) | |||
24 | A, i, 2, 1, j... | BETA-CAROTENE | non-polymer | 536.9 | 58 | Chemie (BCR) | |||
25 | L, a, F, 2, A... | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 27 | Chemie (LHG) | |||
26 | a, 2, A, 0, b... | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | non-polymer | 787.2 | 16 | Chemie (LMG) | |||
27 | a, A, B | ACETATE ION | non-polymer | 59.0 | 4 | Chemie (ACT) | |||
28 | h, B | beta,beta-carotene-4,4'-dione | non-polymer | 564.8 | 2 | Chemie (45D) | |||
29 | 2, b, B | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
30 | i, M, b, B, m... | beta,beta-caroten-4-one | non-polymer | 550.9 | 7 | Chemie (ECH) | |||
31 | L, 0, F, b, B... | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | non-polymer | 795.1 | 7 | Chemie (SQD) | |||
32 | 2, l, b, L, B... | CALCIUM ION | non-polymer | 40.1 | 6 | Chemie (CA) | |||
33 | b, B | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
34 | j, F, J, 7 | (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol | non-polymer | 568.9 | 4 | Chemie (ZEX) | |||
35 | L, 0, F, l, 1 | DODECYL-BETA-D-MALTOSIDE | non-polymer | 510.6 | 5 | Chemie (LMT) | |||
36 | I | (3'R)-3'-hydroxy-beta,beta-caroten-4-one | non-polymer | 566.9 | 1 | Chemie (EQ3) | |||
37 | L | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | non-polymer | 949.3 | 1 | Chemie (DGD) | |||
38 | water | water | 18.0 | 889 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 33 |
Total formula weight | 746428.3 | |
Non-Polymers* | Number of molecules | 443 |
Total formula weight | 341294.5 | |
All* | Total formula weight | 1087722.8 |