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5OY0

Structure of synechocystis photosystem I trimer at 2.5A resolution

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, L
(A, a)
Photosystem I P700 chlorophyll a apoprotein A1polymer75183036.42UniProt (P29254)
Pfam (PF00223)
Synechocystis sp. PCC 6803PsaA
2B, X
(B, 2)
Photosystem I P700 chlorophyll a apoprotein A2polymer73181369.52UniProt (P29255)
Pfam (PF00223)
Synechocystis sp. PCC 6803PsaB
3C, Y
(C, 3)
Photosystem I iron-sulfur centerpolymer808706.12UniProt (P32422)
Pfam (PF12838)
Synechocystis sp. PCC 68039 kDa polypeptide,PSI-C,Photosystem I subunit VII,PsaC
4D, O
(D, d)
Photosystem I reaction center subunit IIpolymer14115663.72UniProt (P19569)
Pfam (PF02531)
Synechocystis sp. PCC 6803Photosystem I 16 kDa polypeptide,PSI-D
5AA, E
(E, 5)
Photosystem I reaction center subunit IVpolymer697680.52UniProt (P12975)
Pfam (PF02427)
Synechocystis sp. PCC 6803Photosystem I 8.1 kDa protein,p30 protein
6BA, F, Q
(F, f, 6)
Photosystem I reaction center subunit IIIpolymer14315791.13UniProt (P29256)
Pfam (PF02507)
Synechocystis sp. PCC 6803PSI-F
7G, R
(I, i)
Photosystem I reaction center subunit VIIIpolymer404414.12UniProt (Q55330)
Pfam (PF00796)
Synechocystis sp. PCC 6803
8DA, H, S
(J, j, 7)
Photosystem I reaction center subunit IXpolymer404535.43UniProt (Q55329)
Pfam (PF01701)
Synechocystis sp. PCC 6803
9I
(K)
Photosystem I reaction center subunit PsaK 2polymer808237.81UniProt (P74564)
Pfam (PF01241)
Synechocystis sp. PCC 6803Photosystem I subunit X 2
10J, U
(L, l)
Photosystem I reaction center subunit XIpolymer15716631.82UniProt (P37277)
Pfam (PF02605)
Synechocystis sp. PCC 6803PSI subunit V,PSI-L
11GA, K, V
(M, m, 9)
Photosystem I reaction center subunit XIIpolymer313382.13UniProt (P72986)
Pfam (PF07465)
Synechocystis sp. PCC 6803PSI-M
12M
(b)
Photosystem I P700 chlorophyll a apoprotein A2polymer72981167.31UniProt (P29255)
Pfam (PF00223)
Synechocystis sp. PCC 6803PsaB
13N
(c)
Photosystem I iron-sulfur centerpolymer818837.31UniProt (P32422)
Pfam (PF12838)
Synechocystis sp. PCC 68039 kDa polypeptide,PSI-C,Photosystem I subunit VII,PsaC
14P
(e)
Photosystem I reaction center subunit IVpolymer687552.41UniProt (P12975)
Pfam (PF02427)
Synechocystis sp. PCC 6803Photosystem I 8.1 kDa protein,p30 protein
15T
(k)
Photosystem I reaction center subunit PsaK 2polymer788037.51UniProt (P74564)
Pfam (PF01241)
Synechocystis sp. PCC 6803Photosystem I subunit X 2
16W
(1)
Photosystem I P700 chlorophyll a apoprotein A1polymer74482280.51UniProt (P29254)
Pfam (PF00223)
Synechocystis sp. PCC 6803PsaA
17Z
(4)
Photosystem I reaction center subunit IIpolymer14015532.61UniProt (P19569)
Pfam (PF02531)
Synechocystis sp. PCC 6803Photosystem I 16 kDa polypeptide,PSI-D
18CA
(h)
Photosystem I reaction center subunit VIIIpolymer384228.01UniProt (Q55330)
Pfam (PF00796)
Synechocystis sp. PCC 6803
19EA
(8)
Photosystem I reaction center subunit PsaK 2polymer798124.61UniProt (P74564)
Pfam (PF01241)
Synechocystis sp. PCC 6803Photosystem I subunit X 2
20FA
(0)
Photosystem I reaction center subunit XIpolymer15416300.41UniProt (P37277)
Pfam (PF02605)
Synechocystis sp. PCC 6803PSI subunit V,PSI-L
21AB, AD, AE, AH, AJ...
(A, B, a, b, 1...)
CHLOROPHYLL Anon-polymer893.5285Chemie (CLA)
22DK, HE, LN, SH, UP...
(b, B, 1, a, 2...)
PHYLLOQUINONEnon-polymer450.76Chemie (PQN)
23AF, BF, HQ, IQ, MN...
(C, 3, 1, a, c...)
IRON/SULFUR CLUSTERnon-polymer351.69Chemie (SF4)
24AC, AL, AQ, BC, BO...
(A, i, 2, 1, j...)
BETA-CAROTENEnon-polymer536.958Chemie (BCR)
25AG, AI, CF, CI, CQ...
(L, a, F, 2, A...)
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLEnon-polymer723.027Chemie (LHG)
26BI, BQ, DI, DQ, EC...
(a, 2, A, 0, b...)
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDEnon-polymer787.216Chemie (LMG)
27FI, HC, VE, ZE
(a, A, B)
ACETATE IONnon-polymer59.04Chemie (ACT)
28NQ, TC
(h, B)
beta,beta-carotene-4,4'-dionenon-polymer564.82Chemie (45D)
29GO, QI, UC
(2, b, B)
CHLORIDE IONnon-polymer35.53Chemie (CL)
30BL, DG, GK, KE, PI...
(i, M, b, B, m...)
beta,beta-caroten-4-onenon-polymer550.97Chemie (ECH)
31CG, FR, GF, NK, SE...
(L, 0, F, b, B...)
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLnon-polymer795.17Chemie (SQD)
32EQ, JL, PK, SF, TE...
(2, l, b, L, B...)
CALCIUM IONnon-polymer40.16Chemie (CA)
33QK, UE
(b, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
34DL, FF, KF, QQ
(j, F, J, 7)
(1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-olnon-polymer568.94Chemie (ZEX)
35BG, GR, HF, SL, XN
(L, 0, F, l, 1)
DODECYL-BETA-D-MALTOSIDEnon-polymer510.65Chemie (LMT)
36JF
(I)
(3'R)-3'-hydroxy-beta,beta-caroten-4-onenon-polymer566.91Chemie (EQ3)
37ZF
(L)
DIGALACTOSYL DIACYL GLYCEROL (DGDG)non-polymer949.31Chemie (DGD)
38AS, BS, CS, DS, ES...
(j, l, m, 1, 2...)
waterwater18.0889Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains33
Total formula weight746428.3
Non-Polymers*Number of molecules443
Total formula weight341294.5
All*Total formula weight1087722.8
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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