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5OR3

Crystal structure of Aspergillus oryzae catechol oxidase in met/deoxy-form

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
catechol oxidasepolymer38342024.94UniProt (Q2UNF9)
Pfam (PF00264)
Aspergillus oryzae (strain ATCC 42149 / RIB 40) (Yellow koji mold)
2E, G
(E, G)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.52In PDB
GlyTouCan (G15407YE)
3F
(F)
alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched748.71In PDB
GlyTouCan (G22573RC)
4H
(H)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.41In PDB
GlyTouCan (G42666HT)
5DA, EA, I, J, JA...
(C, A, D, B)
COPPER (II) IONnon-polymer63.58Chemie (CU)
6FA, K, LA, O, U
(C, A, D, B)
alpha-D-mannopyranosenon-polymer180.25Chemie (MAN)
7GA, HA, L, M, MA...
(C, A, D, B)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.210Chemie (NAG)
8AA, BA, CA, P, Q...
(B, A)
1,2-ETHANEDIOLnon-polymer62.17Chemie (EDO)
9X, Y
(B)
CITRATE ANIONnon-polymer189.12Chemie (FLC)
10IA
(C)
PEROXIDE IONnon-polymer32.01Chemie (PER)
11PA, QA, RA, SA
(A, B, C, D)
waterwater18.01177Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight168099.4
BranchedNumber of molecules4
Total formula weight2346.2
Non-Polymers*Number of molecules33
Total formula weight4465.9
All*Total formula weight174911.5
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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