5OQP
Crystal structure of the S. cerevisiae condensin Ycg1-Brn1 subcomplex bound to DNA (crystal form I)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Condensin complex subunit 3 | polymer | 869 | 99529.7 | 1 | UniProt (Q06680) Pfam (PF12719) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | CAPG homolog |
| 2 | B (B) | Condensin complex subunit 2 | polymer | 152 | 18134.6 | 1 | UniProt (P38170) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Barren homolog,CAPH homolog |
| 3 | C, D (C, D) | DNA (5'-D(*GP*AP*TP*GP*TP*GP*TP*AP*GP*CP*TP*AP*CP*AP*CP*AP*TP*C)-3') | polymer | 18 | 5515.6 | 2 | synthetic construct | ||
| 4 | E (A) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 1 | Chemie (1PE) | |||
| 5 | F (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) |
Sequence modifications
A: 6 - 932 (UniProt: Q06680)
B: 384 - 529 (UniProt: P38170)
| PDB | External Database | Details |
|---|---|---|
| Met 5 | - | initiating methionine |
| - | Gln 499 | deletion |
| - | Glu 500 | deletion |
| - | Glu 501 | deletion |
| - | Lys 502 | deletion |
| - | Ile 503 | deletion |
| - | Lys 504 | deletion |
| - | Ser 505 | deletion |
| - | Lys 506 | deletion |
| - | Lys 507 | deletion |
| - | Ile 508 | deletion |
| - | Asn 509 | deletion |
| - | Arg 510 | deletion |
| - | Arg 511 | deletion |
| - | Asn 512 | deletion |
| - | Glu 513 | deletion |
| - | Thr 514 | deletion |
| - | Ser 515 | deletion |
| - | Val 516 | deletion |
| - | Asp 517 | deletion |
| - | Glu 518 | deletion |
| - | Glu 519 | deletion |
| - | Asp 520 | deletion |
| - | Glu 521 | deletion |
| - | Asn 522 | deletion |
| - | Gly 523 | deletion |
| - | Thr 524 | deletion |
| - | His 525 | deletion |
| - | Asn 526 | deletion |
| - | Asp 527 | deletion |
| - | Glu 528 | deletion |
| - | Val 529 | deletion |
| - | Asn 530 | deletion |
| - | Glu 531 | deletion |
| - | Asp 532 | deletion |
| - | Glu 533 | deletion |
| - | Glu 534 | deletion |
| - | Asp 535 | deletion |
| - | Asp 536 | deletion |
| - | Asn 537 | deletion |
| - | Ile 538 | deletion |
| - | Ser 539 | deletion |
| - | Ser 540 | deletion |
| - | Phe 541 | deletion |
| - | His 542 | deletion |
| - | Ser 543 | deletion |
| - | Ala 544 | deletion |
| - | Val 545 | deletion |
| - | Glu 546 | deletion |
| - | Asn 547 | deletion |
| - | Leu 548 | deletion |
| - | Val 549 | deletion |
| - | Gln 550 | deletion |
| - | Gly 551 | deletion |
| - | Asn 552 | deletion |
| - | Gly 553 | deletion |
| - | Asn 554 | deletion |
| - | Val 555 | deletion |
| PDB | External Database | Details |
|---|---|---|
| Gly 378 | - | expression tag |
| Pro 379 | - | expression tag |
| Leu 380 | - | expression tag |
| Gly 381 | - | expression tag |
| His 382 | - | expression tag |
| Met 383 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 128695.5 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 334.3 | |
| All* | Total formula weight | 129029.9 |
