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5ON2

Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformation

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, DLeucine--tRNA ligasepolymer88099486.02UniProt (P07813)
Pfam (PF09334)
Pfam (PF13603)
Pfam (PF00133)
Pfam (PF08264)
In PDB
Escherichia coli (strain K12)Leucyl-tRNA synthetase,LeuRS
2B, EtRNA(leu)polymer8728052.72GenBank (1231762938)Escherichia coli
3A, DZINC IONnon-polymer65.42Chemie (ZN)
4A, D5'-O-(L-leucylsulfamoyl)adenosinenon-polymer459.52Chemie (LSS)
5A, D2'-(L-NORVALYL)AMINO-2'-DEOXYADENOSINEnon-polymer365.42Chemie (VRT)
6B, EMAGNESIUM IONnon-polymer24.32Chemie (MG)
Sequence modifications
A, D: 1 - 860 (UniProt: P07813)
PDBExternal DatabaseDetails
Met -19-initiating methionine
Gly -18-expression tag
Ser -17-expression tag
Ser -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
Gly -7-expression tag
Leu -6-expression tag
Val -5-expression tag
Pro -4-expression tag
Arg -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Ala 252Thr 252engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight255077.3
Non-Polymers*Number of molecules8
Total formula weight1829.2
All*Total formula weight256906.4
*Water molecules are not included.

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PDB entries from 2024-06-12

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