5OJQ
The modeled structure of of wild type extended type VI secretion system sheath/tube complex in vibrio cholerae based on cryo-EM reconstruction of the non-contractile sheath/tube complex
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, AA, C, CA, E... (1, 2, 3, 4, 5...) | Haemolysin co-regulated protein | polymer | 170 | 18878.1 | 18 | UniProt (P72350) Pfam (PF05638) | Vibrio cholerae | Hcp,Hcp1 family type VI secretion system effector,Type VI secretion system effector,Hcp1 family protein |
| 2 | B, BA, D, DA, F... (A, B, C, D, E...) | Type VI secretion protein | polymer | 473 | 53504.4 | 18 | UniProt (A0A085SGI6) Pfam (PF05943) Pfam (PF18945) UniProt (by SIFTS) (Q9KN57) | Vibrio cholerae | Type VI secretion system protein ImpC,VipB |
| 3 | AB, BB, EA, FA, GA... (a, G, H, I, J...) | VipA | polymer | 155 | 17099.4 | 18 | UniProt (A0A023PRF3) Pfam (PF05591) UniProt (by SIFTS) (Q9KN58) | Vibrio cholerae |
Sequence modifications
A, B, C, D, E, F, X, Z, c, e, g, i, Y, b, d, f, h, j: 17 - 489 (UniProt: A0A085SGI6)
| PDB | External Database | Details |
|---|---|---|
| Cys 29 | Ile 28 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 54 |
| Total formula weight | 1610674.3 | |
| All* | Total formula weight | 1610674.3 |
