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5ODI

Heterodisulfide reductase / [NiFe]-hydrogenase complex from Methanothermococcus thermolithotrophicus cocrystallized with CoM-SH

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, G
(A, G)
Heterodisulfide reductase, subunit Apolymer65471591.72Pfam (PF00890)
Pfam (PF13187)
Pfam (PF12838)
UniProt (by SIFTS) (A0A2D0TCB9)
Methanothermococcus thermolithotrophicus DSM 2095
2B, H
(B, H)
Heterodisulfide reductase, subunit Bpolymer29132075.32Pfam (PF02754)
UniProt (by SIFTS) (A0A2D0TCB4)
Methanothermococcus thermolithotrophicus DSM 2095
3C, I
(C, I)
Heterodisulfide reductase, subunit Cpolymer18420483.72Pfam (PF13183)
UniProt (by SIFTS) (A0A2D0TC97)
Methanothermococcus thermolithotrophicus DSM 2095
4D, J
(D, J)
Methyl-viologen reducing hydrogenase, subunit Dpolymer14016057.52Pfam (PF02662)
UniProt (by SIFTS) (A0A2D0TC98)
Methanothermococcus thermolithotrophicus DSM 2095
5E, K
(E, K)
Methyl-viologen reducing hydrogenase, subunit Gpolymer29932511.42Pfam (PF01058)
UniProt (by SIFTS) (A0A2D0TC99)
Methanothermococcus thermolithotrophicus DSM 2095
6F, L
(F, L)
Methyl-viologen reducing hydrogenase, subunit Apolymer47353129.62Pfam (PF00374)
UniProt (by SIFTS) (A0A2D0TCA6)
Methanothermococcus thermolithotrophicus DSM 2095
7CA, KA, M
(D, G, A)
ACETATE IONnon-polymer59.03Chemie (ACT)
8LA, N
(G, A)
FLAVIN-ADENINE DINUCLEOTIDEnon-polymer785.52Chemie (FAD)
9AA, AB, BB, CB, EA...
(C, K, E, G, A...)
IRON/SULFUR CLUSTERnon-polymer351.622Chemie (SF4)
10DB, SA, U, V, WA
(K, G, A, H)
GLYCEROLnon-polymer92.15Chemie (GOL)
11TA, UA, W, X
(H, B)
Non-cubane [4Fe-4S]-clusternon-polymer351.64Chemie (9S8)
12VA, Y
(H, B)
1-THIOETHANESULFONIC ACIDnon-polymer142.22Chemie (COM)
13BA, ZA
(D, J)
FE2/S2 (INORGANIC) CLUSTERnon-polymer175.82Chemie (FES)
14DA
(D)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
15EB, HA
(L, F)
formyl[bis(hydrocyanato-1kappaC)]ironnickel(Fe-Ni)non-polymer195.62Chemie (NFU)
16FB, IA
(L, F)
FE (III) IONnon-polymer55.82Chemie (FE)
17JA
(G)
3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOLnon-polymer634.81Chemie (PE3)
18GB, HB, IB, JB, KB...
(A, B, C, D, E...)
waterwater18.0554Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight451698.3
Non-Polymers*Number of molecules46
Total formula weight13247.1
All*Total formula weight464945.5
*Water molecules are not included.

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PDB entries from 2025-12-24

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