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5ODH

Heterodisulfide reductase / [NiFe]-hydrogenase complex from Methanothermococcus thermolithotrophicus soaked with heterodisulfide for 3.5 minutes

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, G
(A, G)
Heterodisulfide reductase, subunit Apolymer65471591.72UniProt (by SIFTS) (A0A2D0TCB9)Methanothermococcus thermolithotrophicus DSM 2095
2B, H
(B, H)
Heterodisulfide reductase, subunit Bpolymer29132075.32UniProt (by SIFTS) (A0A2D0TCB4)Methanothermococcus thermolithotrophicus DSM 2095
3C, I
(C, I)
Heterodisulfide reductase, subunit Cpolymer18420483.72UniProt (by SIFTS) (A0A2D0TC97)Methanothermococcus thermolithotrophicus DSM 2095
4D, J
(D, J)
Methyl-viologen reducing hydrogenase, subunit Dpolymer14016057.52UniProt (by SIFTS) (A0A2D0TC98)Methanothermococcus thermolithotrophicus DSM 2095
5E, K
(E, K)
Methyl-viologen reducing hydrogenase, subunit Gpolymer29932511.42UniProt (by SIFTS) (A0A2D0TC99)Methanothermococcus thermolithotrophicus DSM 2095
6F, L
(F, L)
Methyl-viologen reducing hydrogenase, subunit Apolymer47353129.62UniProt (by SIFTS) (A0A2D0TCA6)Methanothermococcus thermolithotrophicus DSM 2095
7AA, BA, BB, CB, EA...
(C, I, E, K, A...)
IRON/SULFUR CLUSTERnon-polymer351.622Chemie (SF4)
8HA, HB, S, SA, Y...
(E, K, A, G, B)
GLYCEROLnon-polymer92.16Chemie (GOL)
PubChem (753)
9IA, IB, JA, T
(F, L, A)
3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOLnon-polymer634.84Chemie (PE3)
PubChem (656926)
10U, WA
(A, G)
FLAVIN-ADENINE DINUCLEOTIDEnon-polymer785.52Chemie (FAD)
11V, W, XA, YA
(B, H)
Non-cubane [4Fe-4S]-clusternon-polymer351.64Chemie (9S8)
12X, ZA
(B, H)
1-THIOETHANESULFONIC ACIDnon-polymer142.22Chemie (COM)
PubChem (598)
13CA, DB
(D, J)
FE2/S2 (INORGANIC) CLUSTERnon-polymer175.82Chemie (FES)
14DA
(D)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
PubChem (3777159)
15JB, KA
(L, F)
formyl[bis(hydrocyanato-1kappaC)]ironnickel(Fe-Ni)non-polymer195.62Chemie (NFU)
16KB, LA, TA
(L, F, G)
FE (III) IONnon-polymer55.83Chemie (FE)
PubChem (29936)
17UA, VA
(G)
ACETATE IONnon-polymer59.02Chemie (ACT)
PubChem (175)
18AB
(H)
Coenzyme Bnon-polymer343.31Chemie (TP7)
PubChem (350)
PubChem (5462265)
PubChem (5486800)
PubChem (20831724)
19LB, MB, NB, OB, PB...
(A, B, C, D, E...)
waterwater18.0610Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight451698.3
Non-Polymers*Number of molecules51
Total formula weight15583.6
All*Total formula weight467282.0
*Water molecules are not included.

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PDB entries from 2026-04-08

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