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5ODC

Heterodisulfide reductase / [NiFe]-hydrogenase complex from Methanothermococcus thermolithotrophicus at 2.3 A resolution

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, G
(A, G)
Heterodisulfide reductase, subunit Apolymer65471591.72Pfam (PF00890)
Pfam (PF13187)
Pfam (PF12838)
UniProt (by SIFTS) (A0A2D0TCB9)
Methanothermococcus thermolithotrophicus DSM 2095
2B, H
(B, H)
Heterodisulfide reductase, subunit Bpolymer29132075.32Pfam (PF02754)
UniProt (by SIFTS) (A0A2D0TCB4)
Methanothermococcus thermolithotrophicus DSM 2095
3C, I
(C, I)
Heterodisulfide reductase, subunit Cpolymer18420483.72Pfam (PF13183)
UniProt (by SIFTS) (A0A2D0TC97)
Methanothermococcus thermolithotrophicus DSM 2095
4D, J
(D, J)
Methyl-viologen reducing hydrogenase subunit Dpolymer14016057.52Pfam (PF02662)
UniProt (by SIFTS) (A0A2D0TC98)
Methanothermococcus thermolithotrophicus DSM 2095
5E, K
(E, K)
Methyl-viologen reducing hydrogenase subunit Gpolymer29932511.42Pfam (PF01058)
UniProt (by SIFTS) (A0A2D0TC99)
Methanothermococcus thermolithotrophicus DSM 2095
6F, L
(F, L)
Methyl-viologen reducing hydrogenase subunit Apolymer47353129.62Pfam (PF00374)
UniProt (by SIFTS) (A0A2D0TCA6)
Methanothermococcus thermolithotrophicus DSM 2095
7M, SA
(A, G)
FLAVIN-ADENINE DINUCLEOTIDEnon-polymer785.52Chemie (FAD)
8N, TA
(A, G)
SODIUM IONnon-polymer23.02Chemie (NA)
9CA, O, QA, UA, VA
(B, A, F, G)
ACETATE IONnon-polymer59.05Chemie (ACT)
10P
(A)
3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOLnon-polymer634.81Chemie (PE3)
11AB, BB, EA, FA, JB...
(G, C, I, E, K...)
IRON/SULFUR CLUSTERnon-polymer351.622Chemie (SF4)
12CB, DA, DB, EB, FB...
(G, B, C, D, E...)
GLYCEROLnon-polymer92.115Chemie (GOL)
13AA, BA, GB, HB
(B, H)
Non-cubane [4Fe-4S]-clusternon-polymer351.64Chemie (9S8)
14HA, LB
(D, J)
FE2/S2 (INORGANIC) CLUSTERnon-polymer175.82Chemie (FES)
15IA
(D)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
16OA, SB
(F, L)
CALCIUM IONnon-polymer40.12Chemie (CA)
17IB, PA
(I, F)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
18RA, TB
(F, L)
formyl[bis(hydrocyanato-1kappaC)]ironnickel(Fe-Ni)non-polymer195.62Chemie (NFU)
19AC, BC, CC, DC, EC...
(G, H, I, J, K...)
waterwater18.0832Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight451698.3
Non-Polymers*Number of molecules60
Total formula weight14064.8
All*Total formula weight465763.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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