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5OCA

PCSK9:Fab Complex with Dextran Sulfate

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Proprotein convertase subtilisin/kexin type 9polymer12614107.81UniProt (Q8NBP7)
Pfam (PF05922)
Homo sapiens (Human)Neural apoptosis-regulated convertase 1,NARC-1,Proprotein convertase 9,PC9,Subtilisin/kexin-like protease PC9
2B
(B)
Proprotein convertase subtilisin/kexin type 9polymer54057328.61UniProt (Q8NBP7)
Pfam (PF00082)
Pfam (PF18459)
Pfam (PF18464)
Pfam (PF18463)
Homo sapiens (Human)Neural apoptosis-regulated convertase 1,NARC-1,Proprotein convertase 9,PC9,Subtilisin/kexin-like protease PC9
3C
(H)
Fab from LDLR competitive antibody: Heavy chainpolymer23825489.31Homo sapiens (Human)
4D
(L)
Fab from LDLR competitive antibody: Light chainpolymer21722626.91Homo sapiens (Human)
5E
(C)
2,3,4-tri-O-sulfo-beta-D-altropyranose-(1-6)-2,3-di-O-sulfo-alpha-L-glucopyranosebranched742.61In PDB
BIRD (PRD_900071)
GlyTouCan (G96300CN)
Heparan sulfate disaccharide
6F, G
(B)
SODIUM IONnon-polymer23.02Chemie (NA)
7H, I, J, K
(A, B, H, L)
waterwater18.0788Chemie (HOH)
Sequence modifications
A: 31 - 152 (UniProt: Q8NBP7)
PDBExternal DatabaseDetails
Gly 27-expression tag
Ala 28-expression tag
Met 29-expression tag
Gly 30-expression tag
B: 153 - 692 (UniProt: Q8NBP7)
PDBExternal DatabaseDetails
Ile 474Val 474conflict
Ala 533Asn 533conflict
Gly 620Glu 620conflict
Glu 670Gly 670conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight119552.6
BranchedNumber of molecules1
Total formula weight742.6
Non-Polymers*Number of molecules2
Total formula weight46.0
All*Total formula weight120341.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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