5O6Y
Crystal structure of the Bc1960 peptidoglycan N-acetylglucosamine deacetylase in complex with 4-naphthalen-1-yl-~{N}-oxidanyl-benzamide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Peptidoglycan N-acetylglucosamine deacetylase | polymer | 214 | 24236.4 | 1 | UniProt (Q81EK9) Pfam (PF01522) In PDB | Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) | |
2 | B, C, D | Peptidoglycan N-acetylglucosamine deacetylase | polymer | 214 | 24252.4 | 3 | UniProt (Q81EK9) Pfam (PF01522) In PDB | Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) | |
3 | D, A, C, B | SULFATE ION | non-polymer | 96.1 | 9 | Chemie (SO4) | |||
4 | D, A, C, B | 4-naphthalen-1-yl-~{N}-oxidanyl-benzamide | non-polymer | 263.3 | 4 | Chemie (5YA) | |||
5 | A, C | 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL | non-polymer | 634.8 | 2 | Chemie (PE3) | |||
6 | B, D, A, C | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 11 | Chemie (PEG) | |||
7 | A | 2-(2-METHOXYETHOXY)ETHANOL | non-polymer | 120.1 | 1 | Chemie (PG0) | |||
8 | C, B, D, A | SODIUM ION | non-polymer | 23.0 | 21 | Chemie (NA) | |||
9 | D, B, A | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
10 | D, C, B | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
11 | B | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 2 | Chemie (DMS) | |||
12 | water | water | 18.0 | 748 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 96993.6 | |
Non-Polymers* | Number of molecules | 58 |
Total formula weight | 5517.2 | |
All* | Total formula weight | 102510.8 |