5O61
The complete structure of the Mycobacterium smegmatis 70S ribosome
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (3) | 50S ribosomal protein bL37 | polymer | 24 | 2841.4 | 1 | UniProt (A0QTP4) | Mycobacterium smegmatis str. MC2 155 | bl37 |
| 2 | B (A) | 23S rRNA | polymer | 3120 | 1012140.9 | 1 | GenBank (118168627) | Mycobacterium smegmatis str. MC2 155 | |
| 3 | C (B) | 5S rRNA | polymer | 118 | 38061.8 | 1 | GenBank (118168627) | Mycobacterium smegmatis str. MC2 155 | |
| 4 | D (C) | 50S ribosomal protein L2 | polymer | 278 | 30425.9 | 1 | UniProt (A0QSD4) Pfam (PF00181) Pfam (PF03947) | Mycobacterium smegmatis str. MC2 155 | uL2 |
| 5 | E (D) | 50S ribosomal protein L3 | polymer | 217 | 23011.4 | 1 | UniProt (A0QSD1) Pfam (PF00297) | Mycobacterium smegmatis str. MC2 155 | uL3 |
| 6 | F (E) | 50S ribosomal protein L4 | polymer | 215 | 22920.9 | 1 | UniProt (A0QSD2) Pfam (PF00573) | Mycobacterium smegmatis str. MC2 155 | uL4 |
| 7 | G (F) | 50S ribosomal protein L5 | polymer | 187 | 21152.3 | 1 | UniProt (A0QSG1) Pfam (PF00281) Pfam (PF00673) | Mycobacterium smegmatis str. MC2 155 | uL5 |
| 8 | H (G) | 50S ribosomal protein L6 | polymer | 179 | 19483.4 | 1 | UniProt (A0QSG4) Pfam (PF00347) | Mycobacterium smegmatis str. MC2 155 | uL6 |
| 9 | I (H) | 50S ribosomal protein L9 | polymer | 151 | 15949.3 | 1 | UniProt (A0R7F6) Pfam (PF01281) Pfam (PF03948) | Mycobacterium smegmatis str. MC2 155 | bL9 |
| 10 | J (I) | 50S ribosomal protein L10 | polymer | 175 | 18035.7 | 1 | UniProt (A0QS62) Pfam (PF00466) | Mycobacterium smegmatis str. MC2 155 | uL10 |
| 11 | K (J) | 50S ribosomal protein L11 | polymer | 142 | 15023.4 | 1 | UniProt (A0QS45) Pfam (PF00298) Pfam (PF03946) | Mycobacterium smegmatis str. MC2 155 | uL11 |
| 12 | L (K) | 50S ribosomal protein L13 | polymer | 147 | 16146.7 | 1 | UniProt (A0QSP8) Pfam (PF00572) | Mycobacterium smegmatis str. MC2 155 | uL13 |
| 13 | M (L) | 50S ribosomal protein L14 | polymer | 122 | 13400.6 | 1 | UniProt (A0QSF9) Pfam (PF00238) | Mycobacterium smegmatis str. MC2 155 | uL14 |
| 14 | N (M) | 50S ribosomal protein L15 | polymer | 147 | 15602.2 | 1 | UniProt (I7G436) Pfam (PF00828) UniProt (by SIFTS) (A0QSG8) | Mycobacterium smegmatis str. MC2 155 | uL15 |
| 15 | O (N) | 50S ribosomal protein L16 | polymer | 138 | 15774.2 | 1 | UniProt (A0QSD8) Pfam (PF00252) | Mycobacterium smegmatis str. MC2 155 | uL16 |
| 16 | P (O) | 50S ribosomal protein L17 | polymer | 199 | 21892.2 | 1 | UniProt (A0QSL9) Pfam (PF01196) | Mycobacterium smegmatis str. MC2 155 | bL17 |
| 17 | Q (P) | 50S ribosomal protein L18 | polymer | 127 | 13711.7 | 1 | UniProt (A0QSG5) Pfam (PF00861) | Mycobacterium smegmatis str. MC2 155 | uL18 |
| 18 | R (Q) | 50S ribosomal protein L19 | polymer | 113 | 12892.8 | 1 | UniProt (A0QV42) Pfam (PF01245) | Mycobacterium smegmatis str. MC2 155 | bL19 |
| 19 | S (R) | 50S ribosomal protein L20 | polymer | 129 | 14494.7 | 1 | UniProt (A0QYU6) Pfam (PF00453) | Mycobacterium smegmatis str. MC2 155 | bL20 |
| 20 | T (S) | 50S ribosomal protein L21 | polymer | 103 | 11055.9 | 1 | UniProt (A0R151) Pfam (PF00829) | Mycobacterium smegmatis str. MC2 155 | bL21 |
| 21 | U (T) | 50S ribosomal protein L22 | polymer | 153 | 16353.6 | 1 | UniProt (A0QSD6) Pfam (PF00237) | Mycobacterium smegmatis str. MC2 155 | uL22 |
| 22 | V (U) | 50S ribosomal protein L23 | polymer | 100 | 11047.8 | 1 | UniProt (A0QSD3) Pfam (PF00276) | Mycobacterium smegmatis str. MC2 155 | uL23 |
| 23 | W (V) | 50S ribosomal protein L24 | polymer | 105 | 11228.9 | 1 | UniProt (A0QSG0) Pfam (PF00467) Pfam (PF17136) | Mycobacterium smegmatis str. MC2 155 | uL24 |
| 24 | X (W) | 50S ribosomal protein L25 | polymer | 215 | 22571.1 | 1 | UniProt (A0R3D2) Pfam (PF01386) Pfam (PF14693) | Mycobacterium smegmatis str. MC2 155 | bL25 |
| 25 | Y (X) | 50S ribosomal protein L27 | polymer | 88 | 9249.6 | 1 | UniProt (A0R150) Pfam (PF01016) | Mycobacterium smegmatis str. MC2 155 | bL27 |
| 26 | Z (Y) | LSU ribosomal protein L28P | polymer | 64 | 6891.0 | 1 | UniProt (I7FJ52) Pfam (PF00830) UniProt (by SIFTS) (A0QV03) | Mycobacterium smegmatis str. MC2 155 | bL28 |
| 27 | AA (Z) | 50S ribosomal protein L29 | polymer | 77 | 8790.9 | 1 | UniProt (A0QSD9) Pfam (PF00831) | Mycobacterium smegmatis str. MC2 155 | uL29 |
| 28 | BA (a) | 50S ribosomal protein L30 | polymer | 61 | 7022.1 | 1 | UniProt (A0QSG7) Pfam (PF00327) | Mycobacterium smegmatis str. MC2 155 | uL30 |
| 29 | CA (b) | 50S ribosomal protein L32 | polymer | 57 | 6467.7 | 1 | UniProt (A0R3I9) Pfam (PF01783) | Mycobacterium smegmatis str. MC2 155 | bL32 |
| 30 | DA (c) | 50S ribosomal protein L33 1 | polymer | 55 | 6468.5 | 1 | UniProt (A0QS39) Pfam (PF00471) | Mycobacterium smegmatis str. MC2 155 | bL33 |
| 31 | EA (d) | 50S ribosomal protein L34 | polymer | 47 | 5522.6 | 1 | UniProt (A0R7K0) Pfam (PF00468) | Mycobacterium smegmatis str. MC2 155 | bL34 |
| 32 | FA (e) | 50S ribosomal protein L35 | polymer | 64 | 7298.5 | 1 | UniProt (A0QYU7) Pfam (PF01632) | Mycobacterium smegmatis str. MC2 155 | bL35 |
| 33 | GA (f) | 50S ribosomal protein L36 | polymer | 37 | 4341.3 | 1 | UniProt (A0QSL4) Pfam (PF00444) | Mycobacterium smegmatis str. MC2 155 | bL36 |
| 34 | HA (g) | 50S ribosomal protein L31 | polymer | 75 | 8312.5 | 1 | UniProt (A0R215) Pfam (PF01197) | Mycobacterium smegmatis str. MC2 155 | bL31 |
| 35 | IA (BA) | 16S rRNA | polymer | 1528 | 495373.7 | 1 | GenBank (118168627) | Mycobacterium smegmatis str. MC2 155 | |
| 36 | JA (BB) | Conserved domain protein | polymer | 33 | 4164.3 | 1 | UniProt (A0QR10) Pfam (PF08213) | Mycobacterium smegmatis str. MC2 155 | bS22 |
| 37 | KA (BC) | 30S ribosomal protein S3 | polymer | 275 | 30191.2 | 1 | UniProt (A0QSD7) Pfam (PF07650) Pfam (PF00189) | Mycobacterium smegmatis str. MC2 155 | uS3 |
| 38 | LA (BD) | 30S ribosomal protein S4 | polymer | 201 | 23415.8 | 1 | UniProt (A0QSL7) Pfam (PF00163) Pfam (PF01479) | Mycobacterium smegmatis str. MC2 155 | uS4 |
| 39 | MA (BE) | 30S ribosomal protein S5 | polymer | 214 | 21946.1 | 1 | UniProt (A0QSG6) Pfam (PF00333) Pfam (PF03719) | Mycobacterium smegmatis str. MC2 155 | uS5 |
| 40 | NA (BF) | 30S ribosomal protein S6 | polymer | 96 | 10991.6 | 1 | UniProt (A0A0D6J3X3) | Mycobacterium smegmatis str. MC2 155 | bS6 |
| 41 | OA (BG) | 30S ribosomal protein S7 | polymer | 156 | 17660.4 | 1 | UniProt (A0QS97) Pfam (PF00177) | Mycobacterium smegmatis str. MC2 155 | uS7 |
| 42 | PA (BH) | 30S ribosomal protein S8 | polymer | 132 | 14492.6 | 1 | UniProt (A0QSG3) Pfam (PF00410) | Mycobacterium smegmatis str. MC2 155 | uS8 |
| 43 | QA (BI) | 30S ribosomal protein S9 | polymer | 150 | 16794.4 | 1 | UniProt (A0QSP9) Pfam (PF00380) | Mycobacterium smegmatis str. MC2 155 | uS9 |
| 44 | RA (BJ) | 30S ribosomal protein S10 | polymer | 101 | 11454.3 | 1 | UniProt (A0QSD0) Pfam (PF00338) | Mycobacterium smegmatis str. MC2 155 | uS10 |
| 45 | SA (BK) | 30S ribosomal protein S11 | polymer | 138 | 14671.8 | 1 | UniProt (A0QSL6) Pfam (PF00411) | Mycobacterium smegmatis str. MC2 155 | uS11 |
| 46 | TA (BL) | 30S ribosomal protein S12 | polymer | 124 | 13896.4 | 1 | UniProt (A0QS96) Pfam (PF00164) | Mycobacterium smegmatis str. MC2 155 | uS12 |
| 47 | UA (BM) | 30S ribosomal protein S13 | polymer | 124 | 14249.6 | 1 | UniProt (A0QSL5) Pfam (PF00416) | Mycobacterium smegmatis str. MC2 155 | uS13 |
| 48 | VA (BN) | 30S ribosomal protein S14 type Z | polymer | 61 | 6976.4 | 1 | UniProt (A0QSG2) Pfam (PF00253) | Mycobacterium smegmatis str. MC2 155 | uS14 |
| 49 | WA (BO) | 30S ribosomal protein S15 | polymer | 89 | 10368.1 | 1 | UniProt (A0QVQ3) Pfam (PF00312) | Mycobacterium smegmatis str. MC2 155 | uS15 |
| 50 | XA (BP) | 30S ribosomal protein S16 | polymer | 156 | 16795.2 | 1 | UniProt (A0QV37) Pfam (PF00886) | Mycobacterium smegmatis str. MC2 155 | bS16 |
| 51 | YA (BQ) | 30S ribosomal protein S17 | polymer | 98 | 11127.0 | 1 | UniProt (A0QSE0) Pfam (PF00366) | Mycobacterium smegmatis str. MC2 155 | uS17 |
| 52 | ZA (BR) | 30S ribosomal protein S18 2 | polymer | 84 | 9524.2 | 1 | UniProt (A0R7F7) Pfam (PF01084) | Mycobacterium smegmatis str. MC2 155 | bS18 |
| 53 | AB (BS) | 30S ribosomal protein S19 | polymer | 93 | 10800.6 | 1 | UniProt (A0QSD5) Pfam (PF00203) | Mycobacterium smegmatis str. MC2 155 | uS19 |
| 54 | BB (BT) | 30S ribosomal protein S20 | polymer | 86 | 9556.1 | 1 | UniProt (A0R102) Pfam (PF01649) | Mycobacterium smegmatis str. MC2 155 | bS20 |
| 55 | CB (BV) | 30S ribosomal protein S2 | polymer | 277 | 30145.2 | 1 | UniProt (A0QVB8) Pfam (PF00318) | Mycobacterium smegmatis str. MC2 155 | uS2 |
| 56 | DB (BW) | P/P-site Phe-tRNA(Phe) | polymer | 76 | 24485.5 | 1 | Mycobacterium smegmatis str. MC2 155 | ||
| 57 | EB (BX) | mRNA fragment | polymer | 6 | 1791.1 | 1 | Mycobacterium smegmatis str. MC2 155 | ||
| 58 | AC, AD, AE, AF, AG... (A, BA, B, BF, BR...) | MAGNESIUM ION | non-polymer | 24.3 | 625 | Chemie (MG) | |||
| 59 | AR, JZ, KZ, WQ, XQ... (g, BN, BR, Y, c...) | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
| 60 | MZ (BW) | PHENYLALANINE | non-polymer | 165.2 | 1 | Chemie (PHE) | Mycobacterium smegmatis str. MC2 155 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 57 |
| Total formula weight | 2306455.4 | |
| Non-Polymers* | Number of molecules | 632 |
| Total formula weight | 15748.3 | |
| All* | Total formula weight | 2322203.6 |
