5O61
The complete structure of the Mycobacterium smegmatis 70S ribosome
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | 3 | 50S ribosomal protein bL37 | polymer | 24 | 2841.4 | 1 | UniProt (A0QTP4) In PDB | Mycobacterium smegmatis str. MC2 155 | bl37 |
2 | A | 23S rRNA | polymer | 3120 | 1012140.9 | 1 | GenBank (118168627) | Mycobacterium smegmatis str. MC2 155 | |
3 | B | 5S rRNA | polymer | 118 | 38061.8 | 1 | GenBank (118168627) | Mycobacterium smegmatis str. MC2 155 | |
4 | C | 50S ribosomal protein L2 | polymer | 278 | 30425.9 | 1 | UniProt (A0QSD4) Pfam (PF00181) Pfam (PF03947) In PDB | Mycobacterium smegmatis str. MC2 155 | uL2 |
5 | D | 50S ribosomal protein L3 | polymer | 217 | 23011.4 | 1 | UniProt (A0QSD1) Pfam (PF00297) In PDB | Mycobacterium smegmatis str. MC2 155 | uL3 |
6 | E | 50S ribosomal protein L4 | polymer | 215 | 22920.9 | 1 | UniProt (A0QSD2) Pfam (PF00573) In PDB | Mycobacterium smegmatis str. MC2 155 | uL4 |
7 | F | 50S ribosomal protein L5 | polymer | 187 | 21152.3 | 1 | UniProt (A0QSG1) Pfam (PF00281) Pfam (PF00673) In PDB | Mycobacterium smegmatis str. MC2 155 | uL5 |
8 | G | 50S ribosomal protein L6 | polymer | 179 | 19483.4 | 1 | UniProt (A0QSG4) Pfam (PF00347) In PDB | Mycobacterium smegmatis str. MC2 155 | uL6 |
9 | H | 50S ribosomal protein L9 | polymer | 151 | 15949.3 | 1 | UniProt (A0R7F6) Pfam (PF01281) Pfam (PF03948) In PDB | Mycobacterium smegmatis str. MC2 155 | bL9 |
10 | I | 50S ribosomal protein L10 | polymer | 175 | 18035.7 | 1 | UniProt (A0QS62) Pfam (PF00466) In PDB | Mycobacterium smegmatis str. MC2 155 | uL10 |
11 | J | 50S ribosomal protein L11 | polymer | 142 | 15023.4 | 1 | UniProt (A0QS45) Pfam (PF03946) Pfam (PF00298) In PDB | Mycobacterium smegmatis str. MC2 155 | uL11 |
12 | K | 50S ribosomal protein L13 | polymer | 147 | 16146.7 | 1 | UniProt (A0QSP8) Pfam (PF00572) In PDB | Mycobacterium smegmatis str. MC2 155 | uL13 |
13 | L | 50S ribosomal protein L14 | polymer | 122 | 13400.6 | 1 | UniProt (A0QSF9) Pfam (PF00238) In PDB | Mycobacterium smegmatis str. MC2 155 | uL14 |
14 | M | 50S ribosomal protein L15 | polymer | 147 | 15602.2 | 1 | UniProt (I7G436) Pfam (PF00828) UniProt (by SIFTS) (A0QSG8) In PDB | Mycobacterium smegmatis str. MC2 155 | uL15 |
15 | N | 50S ribosomal protein L16 | polymer | 138 | 15774.2 | 1 | UniProt (A0QSD8) Pfam (PF00252) In PDB | Mycobacterium smegmatis str. MC2 155 | uL16 |
16 | O | 50S ribosomal protein L17 | polymer | 199 | 21892.2 | 1 | UniProt (A0QSL9) Pfam (PF01196) In PDB | Mycobacterium smegmatis str. MC2 155 | bL17 |
17 | P | 50S ribosomal protein L18 | polymer | 127 | 13711.7 | 1 | UniProt (A0QSG5) Pfam (PF00861) In PDB | Mycobacterium smegmatis str. MC2 155 | uL18 |
18 | Q | 50S ribosomal protein L19 | polymer | 113 | 12892.8 | 1 | UniProt (A0QV42) Pfam (PF01245) In PDB | Mycobacterium smegmatis str. MC2 155 | bL19 |
19 | R | 50S ribosomal protein L20 | polymer | 129 | 14494.7 | 1 | UniProt (A0QYU6) Pfam (PF00453) In PDB | Mycobacterium smegmatis str. MC2 155 | bL20 |
20 | S | 50S ribosomal protein L21 | polymer | 103 | 11055.9 | 1 | UniProt (A0R151) Pfam (PF00829) In PDB | Mycobacterium smegmatis str. MC2 155 | bL21 |
21 | T | 50S ribosomal protein L22 | polymer | 153 | 16353.6 | 1 | UniProt (A0QSD6) Pfam (PF00237) In PDB | Mycobacterium smegmatis str. MC2 155 | uL22 |
22 | U | 50S ribosomal protein L23 | polymer | 100 | 11047.8 | 1 | UniProt (A0QSD3) Pfam (PF00276) In PDB | Mycobacterium smegmatis str. MC2 155 | uL23 |
23 | V | 50S ribosomal protein L24 | polymer | 105 | 11228.9 | 1 | UniProt (A0QSG0) Pfam (PF00467) Pfam (PF17136) In PDB | Mycobacterium smegmatis str. MC2 155 | uL24 |
24 | W | 50S ribosomal protein L25 | polymer | 215 | 22571.1 | 1 | UniProt (A0R3D2) Pfam (PF01386) Pfam (PF14693) In PDB | Mycobacterium smegmatis str. MC2 155 | bL25 |
25 | X | 50S ribosomal protein L27 | polymer | 88 | 9249.6 | 1 | UniProt (A0R150) Pfam (PF01016) In PDB | Mycobacterium smegmatis str. MC2 155 | bL27 |
26 | Y | LSU ribosomal protein L28P | polymer | 64 | 6891.0 | 1 | UniProt (I7FJ52) Pfam (PF00830) UniProt (by SIFTS) (A0QV03) In PDB | Mycobacterium smegmatis str. MC2 155 | bL28 |
27 | Z | 50S ribosomal protein L29 | polymer | 77 | 8790.9 | 1 | UniProt (A0QSD9) Pfam (PF00831) In PDB | Mycobacterium smegmatis str. MC2 155 | uL29 |
28 | a | 50S ribosomal protein L30 | polymer | 61 | 7022.1 | 1 | UniProt (A0QSG7) Pfam (PF00327) In PDB | Mycobacterium smegmatis str. MC2 155 | uL30 |
29 | b | 50S ribosomal protein L32 | polymer | 57 | 6467.7 | 1 | UniProt (A0R3I9) Pfam (PF01783) In PDB | Mycobacterium smegmatis str. MC2 155 | bL32 |
30 | c | 50S ribosomal protein L33 1 | polymer | 55 | 6468.5 | 1 | UniProt (A0QS39) Pfam (PF00471) In PDB | Mycobacterium smegmatis str. MC2 155 | bL33 |
31 | d | 50S ribosomal protein L34 | polymer | 47 | 5522.6 | 1 | UniProt (A0R7K0) Pfam (PF00468) In PDB | Mycobacterium smegmatis str. MC2 155 | bL34 |
32 | e | 50S ribosomal protein L35 | polymer | 64 | 7298.5 | 1 | UniProt (A0QYU7) Pfam (PF01632) In PDB | Mycobacterium smegmatis str. MC2 155 | bL35 |
33 | f | 50S ribosomal protein L36 | polymer | 37 | 4341.3 | 1 | UniProt (A0QSL4) Pfam (PF00444) In PDB | Mycobacterium smegmatis str. MC2 155 | bL36 |
34 | g | 50S ribosomal protein L31 | polymer | 75 | 8312.5 | 1 | UniProt (A0R215) Pfam (PF01197) In PDB | Mycobacterium smegmatis str. MC2 155 | bL31 |
35 | BA | 16S rRNA | polymer | 1528 | 495373.7 | 1 | GenBank (118168627) | Mycobacterium smegmatis str. MC2 155 | |
36 | BB | Conserved domain protein | polymer | 33 | 4164.3 | 1 | UniProt (A0QR10) Pfam (PF08213) In PDB | Mycobacterium smegmatis str. MC2 155 | bS22 |
37 | BC | 30S ribosomal protein S3 | polymer | 275 | 30191.2 | 1 | UniProt (A0QSD7) Pfam (PF07650) Pfam (PF00189) In PDB | Mycobacterium smegmatis str. MC2 155 | uS3 |
38 | BD | 30S ribosomal protein S4 | polymer | 201 | 23415.8 | 1 | UniProt (A0QSL7) Pfam (PF00163) Pfam (PF01479) In PDB | Mycobacterium smegmatis str. MC2 155 | uS4 |
39 | BE | 30S ribosomal protein S5 | polymer | 214 | 21946.1 | 1 | UniProt (A0QSG6) Pfam (PF00333) Pfam (PF03719) In PDB | Mycobacterium smegmatis str. MC2 155 | uS5 |
40 | BF | 30S ribosomal protein S6 | polymer | 96 | 10991.6 | 1 | UniProt (A0A0D6J3X3) In PDB | Mycobacterium smegmatis str. MC2 155 | bS6 |
41 | BG | 30S ribosomal protein S7 | polymer | 156 | 17660.4 | 1 | UniProt (A0QS97) Pfam (PF00177) In PDB | Mycobacterium smegmatis str. MC2 155 | uS7 |
42 | BH | 30S ribosomal protein S8 | polymer | 132 | 14492.6 | 1 | UniProt (A0QSG3) Pfam (PF00410) In PDB | Mycobacterium smegmatis str. MC2 155 | uS8 |
43 | BI | 30S ribosomal protein S9 | polymer | 150 | 16794.4 | 1 | UniProt (A0QSP9) Pfam (PF00380) In PDB | Mycobacterium smegmatis str. MC2 155 | uS9 |
44 | BJ | 30S ribosomal protein S10 | polymer | 101 | 11454.3 | 1 | UniProt (A0QSD0) Pfam (PF00338) In PDB | Mycobacterium smegmatis str. MC2 155 | uS10 |
45 | BK | 30S ribosomal protein S11 | polymer | 138 | 14671.8 | 1 | UniProt (A0QSL6) Pfam (PF00411) In PDB | Mycobacterium smegmatis str. MC2 155 | uS11 |
46 | BL | 30S ribosomal protein S12 | polymer | 124 | 13896.4 | 1 | UniProt (A0QS96) Pfam (PF00164) In PDB | Mycobacterium smegmatis str. MC2 155 | uS12 |
47 | BM | 30S ribosomal protein S13 | polymer | 124 | 14249.6 | 1 | UniProt (A0QSL5) Pfam (PF00416) In PDB | Mycobacterium smegmatis str. MC2 155 | uS13 |
48 | BN | 30S ribosomal protein S14 type Z | polymer | 61 | 6976.4 | 1 | UniProt (A0QSG2) Pfam (PF00253) In PDB | Mycobacterium smegmatis str. MC2 155 | uS14 |
49 | BO | 30S ribosomal protein S15 | polymer | 89 | 10368.1 | 1 | UniProt (A0QVQ3) Pfam (PF00312) In PDB | Mycobacterium smegmatis str. MC2 155 | uS15 |
50 | BP | 30S ribosomal protein S16 | polymer | 156 | 16795.2 | 1 | UniProt (A0QV37) Pfam (PF00886) In PDB | Mycobacterium smegmatis str. MC2 155 | bS16 |
51 | BQ | 30S ribosomal protein S17 | polymer | 98 | 11127.0 | 1 | UniProt (A0QSE0) Pfam (PF00366) In PDB | Mycobacterium smegmatis str. MC2 155 | uS17 |
52 | BR | 30S ribosomal protein S18 2 | polymer | 84 | 9524.2 | 1 | UniProt (A0R7F7) Pfam (PF01084) In PDB | Mycobacterium smegmatis str. MC2 155 | bS18 |
53 | BS | 30S ribosomal protein S19 | polymer | 93 | 10800.6 | 1 | UniProt (A0QSD5) Pfam (PF00203) In PDB | Mycobacterium smegmatis str. MC2 155 | uS19 |
54 | BT | 30S ribosomal protein S20 | polymer | 86 | 9556.1 | 1 | UniProt (A0R102) Pfam (PF01649) In PDB | Mycobacterium smegmatis str. MC2 155 | bS20 |
55 | BV | 30S ribosomal protein S2 | polymer | 277 | 30145.2 | 1 | UniProt (A0QVB8) Pfam (PF00318) In PDB | Mycobacterium smegmatis str. MC2 155 | uS2 |
56 | BW | P/P-site Phe-tRNA(Phe) | polymer | 76 | 24485.5 | 1 | Mycobacterium smegmatis str. MC2 155 | ||
57 | BX | mRNA fragment | polymer | 6 | 1791.1 | 1 | Mycobacterium smegmatis str. MC2 155 | ||
58 | A, BA, B, BF, BR... | MAGNESIUM ION | non-polymer | 24.3 | 625 | Chemie (MG) | |||
59 | g, BN, BR, Y, c... | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
60 | BW | PHENYLALANINE | non-polymer | 165.2 | 1 | Chemie (PHE) | Mycobacterium smegmatis str. MC2 155 |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 57 |
Total formula weight | 2306455.4 | |
Non-Polymers* | Number of molecules | 632 |
Total formula weight | 15748.3 | |
All* | Total formula weight | 2322203.6 |