5O1R
human Fab 5H2 bound to NHBA-C3 from Neisseria meningitidis serogroup B
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | GNA2132 | polymer | 127 | 13706.0 | 2 | UniProt (Q9JPP1) Pfam (PF01298) In PDB | Neisseria meningitidis | Gna2132,Heparin binding protein,Neisserial heparin binding antigen,Putative lipoprotein GNA2132 |
2 | H, I | IGH@ protein | polymer | 265 | 27963.0 | 2 | UniProt (Q6GMX6) Pfam (PF07686) Pfam (PF07654) In PDB | Homo sapiens (Human) | |
3 | L, M | Uncharacterized protein | polymer | 213 | 23094.6 | 2 | UniProt (Q6GMX0) Pfam (PF07686) Pfam (PF07654) In PDB | Homo sapiens (Human) | |
4 | A, H, I, M | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
5 | water | water | 18.0 | 46 | Chemie (HOH) |
Sequence modifications
A, B: 312 - 427 (UniProt: Q9JPP1)
H, I: 1 - 228 (UniProt: Q6GMX6)
L, M: 1 - 213 (UniProt: Q6GMX0)
PDB | External Database | Details |
---|---|---|
Met 309 | - | initiating methionine |
Ala 310 | - | expression tag |
Ser 311 | - | expression tag |
Leu 428 | - | expression tag |
Glu 429 | - | expression tag |
His 430 | - | expression tag |
His 431 | - | expression tag |
His 432 | - | expression tag |
His 433 | - | expression tag |
His 434 | - | expression tag |
His 435 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Val 29 | Ile 48 | conflict |
Ser 31 | - | insertion |
Gly 32 | - | insertion |
Ser 33 | Gly 50 | conflict |
Ser 34 | Tyr 51 | conflict |
Thr 37 | Ser 54 | conflict |
Thr 42 | Pro 59 | conflict |
Pro 43 | Ala 60 | conflict |
Tyr 52 | Arg 69 | conflict |
Thr 53 | Ile 70 | conflict |
Ser 54 | Tyr 71 | conflict |
Tyr 55 | Thr 72 | conflict |
Lys 60 | Asn 77 | conflict |
Leu 71 | Met 88 | conflict |
Met 75 | Thr 92 | conflict |
Lys 85 | Ser 102 | conflict |
Phe 96 | Tyr 113 | conflict |
Asp 100 | Gly 117 | conflict |
Asp 103 | - | insertion |
Val 104 | - | insertion |
Ala 105 | - | insertion |
Ser 106 | - | insertion |
Gly 107 | - | insertion |
Ser 108 | Thr 120 | conflict |
Ser 109 | Tyr 121 | conflict |
Phe 112 | Tyr 124 | conflict |
Arg 220 | Lys 232 | conflict |
Gly 229 | - | expression tag |
Ser 230 | - | expression tag |
Glu 231 | - | expression tag |
Asn 232 | - | expression tag |
Leu 233 | - | expression tag |
Tyr 234 | - | expression tag |
Phe 235 | - | expression tag |
Gln 236 | - | expression tag |
Gly 237 | - | expression tag |
Ser 238 | - | expression tag |
Trp 239 | - | expression tag |
Ser 240 | - | expression tag |
His 241 | - | expression tag |
Pro 242 | - | expression tag |
Gln 243 | - | expression tag |
Phe 244 | - | expression tag |
Glu 245 | - | expression tag |
Lys 246 | - | expression tag |
Gly 247 | - | expression tag |
Gly 248 | - | expression tag |
Ser 249 | - | expression tag |
Gly 250 | - | expression tag |
Gly 251 | - | expression tag |
Gly 252 | - | expression tag |
Ser 253 | - | expression tag |
Gly 254 | - | expression tag |
Gly 255 | - | expression tag |
Gly 256 | - | expression tag |
Ser 257 | - | expression tag |
Trp 258 | - | expression tag |
Ser 259 | - | expression tag |
His 260 | - | expression tag |
Pro 261 | - | expression tag |
Gln 262 | - | expression tag |
Phe 263 | - | expression tag |
Glu 264 | - | expression tag |
Lys 265 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Glu 1 | Asp 23 | conflict |
Val 3 | Gln 25 | conflict |
Thr 7 | Ser 29 | conflict |
Ser 28 | Asn 50 | conflict |
Ser 30 | Asn 52 | conflict |
Gln 38 | Leu 60 | conflict |
Thr 42 | Lys 64 | conflict |
Lys 45 | Asn 67 | conflict |
Thr 48 | Ile 70 | conflict |
Gly 55 | Gln 77 | conflict |
Leu 71 | Phe 93 | conflict |
Glu 81 | Asp 103 | conflict |
Gly 93 | Asn 115 | conflict |
Ser 94 | Ile 116 | conflict |
- | Leu 118 | deletion |
Gln 99 | Gly 122 | conflict |
Lys 102 | Asn 125 | conflict |
Leu 103 | Val 126 | conflict |
Arg 106 | Lys 129 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 129527.1 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 310.3 | |
All* | Total formula weight | 129837.5 |