5NV8
Structural basis for EarP-mediated arginine glycosylation of translation elongation factor EF-P
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | EF-P arginine 32 rhamnosyl-transferase | polymer | 390 | 43678.2 | 1 | UniProt (Q88LS1) Pfam (PF10093) | Pseudomonas putida KT2440 | |
| 2 | B (A) | 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE | non-polymer | 548.3 | 1 | Chemie (TRH) PubChem (686) PubChem (439936) PubChem (439975) PubChem (441247) PubChem (443501) PubChem (10302689) PubChem (15375588) PubChem (16062879) PubChem (20776690) PubChem (24892770) PubChem (46173788) PubChem (24771763) PubChem (49852346) PubChem (46936769) PubChem (121966) PubChem (101989498) PubChem (71485899) PubChem (101437060) PubChem (101488591) PubChem (162935806) PubChem (172638589) | |||
| 3 | C (A) | water | water | 18.0 | 210 | Chemie (HOH) |
Sequence modifications
A: 2 - 377 (UniProt: Q88LS1)
| PDB | External Database | Details |
|---|---|---|
| Met -12 | - | initiating methionine |
| Gly -11 | - | expression tag |
| Ser -10 | - | expression tag |
| Ser -9 | - | expression tag |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Gln -1 | - | expression tag |
| Asp 0 | - | expression tag |
| Pro 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 43678.2 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 548.3 | |
| All* | Total formula weight | 44226.5 |
