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5NGQ

Bicyclic antimicrobial peptides

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Fucose-binding lectin II (PA-IIL)polymer11411734.74UniProt (A0A069Q9V4)
Pfam (PF07472)
UniProt (by SIFTS) (Q9HYN5)
Pseudomonas aeruginosaFucose-binding lectin PA-IIL
2E
(E)
DLS-PRO-ALD-CYS-TYD-ALA-CYD-LYS-ALApolymer91039.21synthetic construct
3F, G, H
(F, G, H)
Fragment of bicyclepolymer4534.73synthetic construct
4I, J, K, L, M...
(A, B, C, D)
CALCIUM IONnon-polymer40.18Chemie (CA)
PubChem (271)
5Q, R, S, T
(E, F, G, H)
3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acidnon-polymer206.24Chemie (ZDC)
PubChem (22086245)
PubChem (58281208)
PubChem (59828179)
PubChem (59899094)
PubChem (67963326)
PubChem (67963545)
PubChem (71050425)
PubChem (134517638)
PubChem (137350205)
PubChem (164138323)
6U, V, W, X, Y...
(A, B, C, D, E...)
waterwater18.0456Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight49582.3
Non-Polymers*Number of molecules12
Total formula weight1145.4
All*Total formula weight50727.7
*Water molecules are not included.

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PDB entries from 2026-05-13

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