5NFG
Structure of recombinant cardosin B from Cynara cardunculus
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Procardosin-B,Procardosin-B | polymer | 383 | 41184.9 | 2 | UniProt (Q9XFX4) Pfam (PF00026) In PDB | Cynara cardunculus (Cardoon) | |
| 2 | C, E | alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 2 | In PDB GlyTouCan (G23622SL) | |||
| 3 | D, F | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 2 | In PDB GlyTouCan (G22573RC) | |||
| 4 | water | water | 18.0 | 141 | Chemie (HOH) |
Sequence modifications
A, B: 2 - 291 (UniProt: Q9XFX4)
A, B: 295 - 383 (UniProt: Q9XFX4)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Arg 45 | Ser 68 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Gly 292 | - | linker |
| Gly 293 | - | linker |
| Gly 294 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 82369.8 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 3643.3 | |
| All* | Total formula weight | 86013.1 |
