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5NET

Localised Reconstruction of Integrin alpha V beta 6 bound to Foot and Mouth Disease Virus O1 Manisa - Pose A.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
11O1 Manisa VP1polymer20822850.91UniProt (Q6PMW3)
Pfam (PF22663)
In PDB
Foot-and-mouth disease virus
22O1 Manisa VP2polymer21824417.51UniProt (Q6PMW3)
Pfam (PF00073)
UniProt (by SIFTS) (D1H101)
In PDB
Foot-and-mouth disease virus
33O1 Manisa VP3polymer22023952.91UniProt (Q80B23)
Pfam (PF00073)
UniProt (by SIFTS) (Q6PMW3)
In PDB
Foot-and-mouth disease virus
44O1 Manisa VP4polymer858766.11UniProt (E1ACS1)
Pfam (PF08935)
UniProt (by SIFTS) (D1H101)
In PDB
Foot-and-mouth disease virus
5AIntegrin alpha-Vpolymer59465353.31UniProt (P06756)
Pfam (PF01839)
Pfam (PF08441)
In PDB
Homo sapiens (Human)Vitronectin receptor subunit alpha
6BIntegrin beta-6polymer47051534.61UniProt (P18564)
Pfam (PF00362)
Pfam (PF18372)
Pfam (PF17205)
In PDB
Homo sapiens (Human)
7C, Dalpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.52In PDB
GlyTouCan (G62182OO)
8Ealpha-D-mannopyranose-(1-2)-alpha-D-mannopyranosebranched342.31In PDB
BIRD (PRD_900111)
GlyTouCan (G53402KW)
2alpha-alpha-mannobiose
9Falpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched748.71In PDB
GlyTouCan (G48068RF)
10Galpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched748.71In PDB
GlyTouCan (G81874LD)
113, Aalpha-D-mannopyranosenon-polymer180.23Chemie (MAN)
12A, B2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
13ACALCIUM IONnon-polymer40.14Chemie (CA)
Sequence modifications
2: 1 - 218 (UniProt: Q6PMW3)
PDBExternal DatabaseDetails
Tyr 93Ser 379conflict
3: 1 - 220 (UniProt: Q80B23)
PDBExternal DatabaseDetails
Arg 56His 560conflict
Thr 168Ala 672conflict
A: 1 - 594 (UniProt: P06756)
PDBExternal DatabaseDetails
Cys 400Met 430conflict
B: 5 - 471 (UniProt: P18564)
PDBExternal DatabaseDetails
Cys 267Ile 287conflict
Asn 449His 469conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight196875.3
BranchedNumber of molecules5
Total formula weight3012.7
Non-Polymers*Number of molecules10
Total formula weight1364.4
All*Total formula weight201252.4
*Water molecules are not included.

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PDB entries from 2024-08-07

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