5NE5
Crystal structure of family 47 alpha-1,2-mannosidase from Caulobacter K31 strain in complex with kifunensine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Mannosyl-oligosaccharide 1,2-alpha-mannosidase | polymer | 447 | 50546.7 | 1 | UniProt (B0SWV2) | Caulobacter sp. | |
| 2 | B (A) | KIFUNENSINE | non-polymer | 232.2 | 1 | Chemie (KIF) PubChem (3829) PubChem (46936476) PubChem (130611) PubChem (51397571) PubChem (51397572) PubChem (52194189) PubChem (52194190) PubChem (58722256) PubChem (71597657) PubChem (71684590) PubChem (92209851) PubChem (101529010) PubChem (101604989) PubChem (11075267) PubChem (146018858) PubChem (156473884) | |||
| 3 | C, D (A) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) PubChem (271) | |||
| 4 | E (A) | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 209.2 | 1 | Chemie (BTB) PubChem (81462) | |||
| 5 | F (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) PubChem (923) | |||
| 6 | G (A) | water | water | 18.0 | 418 | Chemie (HOH) |
Sequence modifications
A: 27 - 462 (UniProt: B0SWV2)
| PDB | External Database | Details |
|---|---|---|
| Met 24 | - | initiating methionine |
| Ala 25 | - | expression tag |
| Ser 26 | - | expression tag |
| Leu 463 | - | expression tag |
| Glu 464 | - | expression tag |
| His 465 | - | expression tag |
| His 466 | - | expression tag |
| His 467 | - | expression tag |
| His 468 | - | expression tag |
| His 469 | - | expression tag |
| His 470 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 50546.7 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 544.6 | |
| All* | Total formula weight | 51091.3 |
