5NDD
Crystal structure of a thermostabilised human protease-activated receptor-2 (PAR2) in complex with AZ8838 at 2.8 angstrom resolution
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Lysozyme,Proteinase-activated receptor 2,Soluble cytochrome b562,Proteinase-activated receptor 2 | polymer | 619 | 69558.9 | 1 | UniProt (D9IEF7) UniProt (P55085) UniProt (P0ABE7) Pfam (PF00959) Pfam (PF00001) Pfam (PF07361) UniProt (by SIFTS) (P00720) | Enterobacteria phage T4 | PAR-2,Coagulation factor II receptor-like 1,G-protein coupled receptor 11,Thrombin receptor-like 1,Cytochrome b-562,PAR-2,Coagulation factor II receptor-like 1,G-protein coupled receptor 11,Thrombin receptor-like 1 |
| 2 | B (A) | (~{S})-(4-fluoranyl-2-propyl-phenyl)-(1~{H}-imidazol-2-yl)methanol | non-polymer | 234.3 | 1 | Chemie (8TZ) | |||
| 3 | C (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 4 | D (A) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 5 | E (A) | water | water | 18.0 | 10 | Chemie (HOH) |
Sequence modifications
A: 1002 - 1161 (UniProt: D9IEF7)
A: 59 - 269 (UniProt: P55085)
A: 2000 - 2104 (UniProt: P0ABE7)
A: 276 - 377 (UniProt: P55085)
| PDB | External Database | Details |
|---|---|---|
| Met 979 | - | initiating methionine |
| Val 980 | - | expression tag |
| Ser 981 | - | expression tag |
| Ala 982 | - | expression tag |
| Ile 983 | - | expression tag |
| Val 984 | - | expression tag |
| Leu 985 | - | expression tag |
| Tyr 986 | - | expression tag |
| Val 987 | - | expression tag |
| Leu 988 | - | expression tag |
| Leu 989 | - | expression tag |
| Ala 990 | - | expression tag |
| Ala 991 | - | expression tag |
| Ala 992 | - | expression tag |
| Ala 993 | - | expression tag |
| His 994 | - | expression tag |
| Ser 995 | - | expression tag |
| Ala 996 | - | expression tag |
| Phe 997 | - | expression tag |
| Ala 998 | - | expression tag |
| Ala 999 | - | expression tag |
| Ala 1000 | - | expression tag |
| Ser 1001 | - | expression tag |
| Thr 1054 | Cys 54 | conflict |
| Ala 1097 | Cys 97 | conflict |
| Ile 1162 | - | linker |
| Tyr 1163 | - | linker |
| Glu 1164 | - | linker |
| Phe 1165 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Ala 89 | Gly 89 | engineered mutation |
| Ala 108 | His 108 | engineered mutation |
| Ala 157 | Gly 157 | engineered mutation |
| Leu 166 | Met 166 | engineered mutation |
| Ala 174 | Tyr 174 | engineered mutation |
| Glu 176 | Val 176 | engineered mutation |
| Gln 222 | Asn 222 | engineered mutation |
| Ala 268 | Met 268 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Trp 2006 | Met 29 | conflict |
| Ile 2101 | His 124 | conflict |
| Leu 2105 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Ala 289 | Ile 289 | engineered mutation |
| Ala 293 | Leu 293 | engineered mutation |
| Ala 378 | - | expression tag |
| Ala 379 | - | expression tag |
| Ala 380 | - | expression tag |
| His 381 | - | expression tag |
| His 382 | - | expression tag |
| His 383 | - | expression tag |
| His 384 | - | expression tag |
| His 385 | - | expression tag |
| His 386 | - | expression tag |
| His 387 | - | expression tag |
| His 388 | - | expression tag |
| His 389 | - | expression tag |
| His 390 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 69558.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 352.2 | |
| All* | Total formula weight | 69911.1 |






