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5NDD

Crystal structure of a thermostabilised human protease-activated receptor-2 (PAR2) in complex with AZ8838 at 2.8 angstrom resolution

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Lysozyme,Proteinase-activated receptor 2,Soluble cytochrome b562,Proteinase-activated receptor 2polymer61969558.91UniProt (D9IEF7)
UniProt (P55085)
UniProt (P0ABE7)
Pfam (PF00959)
Pfam (PF00001)
Pfam (PF07361)
UniProt (by SIFTS) (P00720)
Enterobacteria phage T4PAR-2,Coagulation factor II receptor-like 1,G-protein coupled receptor 11,Thrombin receptor-like 1,Cytochrome b-562,PAR-2,Coagulation factor II receptor-like 1,G-protein coupled receptor 11,Thrombin receptor-like 1
2B
(A)
(~{S})-(4-fluoranyl-2-propyl-phenyl)-(1~{H}-imidazol-2-yl)methanolnon-polymer234.31Chemie (8TZ)
3C
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
4D
(A)
PHOSPHATE IONnon-polymer95.01Chemie (PO4)
5E
(A)
waterwater18.010Chemie (HOH)
Sequence modifications
A: 1002 - 1161 (UniProt: D9IEF7)
PDBExternal DatabaseDetails
Met 979-initiating methionine
Val 980-expression tag
Ser 981-expression tag
Ala 982-expression tag
Ile 983-expression tag
Val 984-expression tag
Leu 985-expression tag
Tyr 986-expression tag
Val 987-expression tag
Leu 988-expression tag
Leu 989-expression tag
Ala 990-expression tag
Ala 991-expression tag
Ala 992-expression tag
Ala 993-expression tag
His 994-expression tag
Ser 995-expression tag
Ala 996-expression tag
Phe 997-expression tag
Ala 998-expression tag
Ala 999-expression tag
Ala 1000-expression tag
Ser 1001-expression tag
Thr 1054Cys 54conflict
Ala 1097Cys 97conflict
Ile 1162-linker
Tyr 1163-linker
Glu 1164-linker
Phe 1165-linker
A: 59 - 269 (UniProt: P55085)
PDBExternal DatabaseDetails
Ala 89Gly 89engineered mutation
Ala 108His 108engineered mutation
Ala 157Gly 157engineered mutation
Leu 166Met 166engineered mutation
Ala 174Tyr 174engineered mutation
Glu 176Val 176engineered mutation
Gln 222Asn 222engineered mutation
Ala 268Met 268engineered mutation
A: 2000 - 2104 (UniProt: P0ABE7)
PDBExternal DatabaseDetails
Trp 2006Met 29conflict
Ile 2101His 124conflict
Leu 2105-linker
A: 276 - 377 (UniProt: P55085)
PDBExternal DatabaseDetails
Ala 289Ile 289engineered mutation
Ala 293Leu 293engineered mutation
Ala 378-expression tag
Ala 379-expression tag
Ala 380-expression tag
His 381-expression tag
His 382-expression tag
His 383-expression tag
His 384-expression tag
His 385-expression tag
His 386-expression tag
His 387-expression tag
His 388-expression tag
His 389-expression tag
His 390-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight69558.9
Non-Polymers*Number of molecules3
Total formula weight352.2
All*Total formula weight69911.1
*Water molecules are not included.

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PDB entries from 2024-11-06

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