5NA6
Structure of Cys-null Se-Met DPP III from Bacteroides thetaiotaomicron
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Putative dipeptidyl-peptidase III | polymer | 683 | 77687.5 | 1 | UniProt (Q8A6N1) Pfam (PF03571) In PDB | Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) | |
2 | A | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
3 | A | ACETATE ION | non-polymer | 59.0 | 4 | Chemie (ACT) | |||
4 | A | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
5 | A | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 1 | Chemie (TRS) | |||
6 | A | 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL | non-polymer | 634.8 | 1 | Chemie (PE3) | |||
7 | water | water | 18.0 | 575 | Chemie (HOH) |
Sequence modifications
A: 1 - 675 (UniProt: Q8A6N1)
PDB | External Database | Details |
---|---|---|
Ser 11 | Cys 11 | engineered mutation |
Ser 158 | Cys 158 | engineered mutation |
Ser 189 | Cys 189 | engineered mutation |
Ser 425 | Cys 425 | engineered mutation |
Ser 450 | Cys 450 | engineered mutation |
Leu 676 | - | expression tag |
Glu 677 | - | expression tag |
His 678 | - | expression tag |
His 679 | - | expression tag |
His 680 | - | expression tag |
His 681 | - | expression tag |
His 682 | - | expression tag |
His 683 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 77687.5 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1081.5 | |
All* | Total formula weight | 78769.0 |